Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS22105

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
1,326,804	-		ABZR87_RS22100	0.12	-0.6
1,326,838	+		ABZR87_RS22100	0.15	-1.4
1,326,838	+		ABZR87_RS22100	0.15	-0.7
1,326,980	+		ABZR87_RS22100	0.28	-0.3
1,326,981	-		ABZR87_RS22100	0.28	-0.3
1,326,981	-		ABZR87_RS22100	0.28	-0.6
1,327,001	+		ABZR87_RS22100	0.30	+0.7
1,327,001	+		ABZR87_RS22100	0.30	-0.0
1,327,001	+		ABZR87_RS22100	0.30	+1.2
1,327,001	+		ABZR87_RS22100	0.30	-1.1
1,327,002	-		ABZR87_RS22100	0.30	+0.2
1,327,098	-		ABZR87_RS22100	0.38	+0.1
1,327,160	+		ABZR87_RS22100	0.44	+0.3
1,327,160	+		ABZR87_RS22100	0.44	-0.9
1,327,161	-		ABZR87_RS22100	0.44	+0.1
1,327,161	-		ABZR87_RS22100	0.44	-0.6
1,327,294	+		ABZR87_RS22100	0.56	-0.5
1,327,295	-		ABZR87_RS22100	0.56	-1.1
1,327,295	-		ABZR87_RS22100	0.56	-0.1
1,327,397	+		ABZR87_RS22100	0.65	-0.5
1,327,398	-		ABZR87_RS22100	0.65	+0.4
1,327,398	-		ABZR87_RS22100	0.65	+0.5
1,327,673	+				+1.6
1,327,838	+		ABZR87_RS22105	0.10	-1.0
1,328,179	+		ABZR87_RS22105	0.68	-0.3
1,328,180	-		ABZR87_RS22105	0.68	-0.4
1,328,180	-		ABZR87_RS22105	0.68	-1.0
1,328,180	-		ABZR87_RS22105	0.68	-0.9
1,328,180	-		ABZR87_RS22105	0.68	-0.7
1,328,385	+				-0.0
1,328,422	-				-1.0
1,328,422	-				-0.1
1,328,463	+				-0.5
1,328,463	+				+0.3
1,328,463	+				+0.3
1,328,463	+				-0.3
1,328,464	-				+0.1
1,328,469	+				-0.1
1,328,469	+				-0.6
1,328,470	-				-0.1
1,328,470	-				+0.3
1,328,492	-		ABZR87_RS22110	0.11	+1.1
1,328,517	+		ABZR87_RS22110	0.13	+1.2
1,328,517	+		ABZR87_RS22110	0.13	-0.2
1,328,518	-		ABZR87_RS22110	0.13	-0.8
1,328,518	-		ABZR87_RS22110	0.13	-0.3
1,328,643	+		ABZR87_RS22110	0.24	+0.1
1,328,643	+		ABZR87_RS22110	0.24	+0.2
1,328,643	+		ABZR87_RS22110	0.24	+1.2
1,328,643	+		ABZR87_RS22110	0.24	-1.1
1,328,644	-		ABZR87_RS22110	0.24	-0.1
1,328,644	-		ABZR87_RS22110	0.24	+0.9
1,328,644	-		ABZR87_RS22110	0.24	+0.8
1,328,761	-		ABZR87_RS22110	0.34	+1.1
1,328,970	+		ABZR87_RS22110	0.52	-0.4
1,328,970	+		ABZR87_RS22110	0.52	-0.8
1,328,971	-		ABZR87_RS22110	0.52	-0.3
1,328,971	-		ABZR87_RS22110	0.52	-0.2
1,329,051	+		ABZR87_RS22110	0.59	-0.3
1,329,051	+		ABZR87_RS22110	0.59	-0.3
1,329,051	+		ABZR87_RS22110	0.59	+0.1
1,329,144	+		ABZR87_RS22110	0.67	-0.6
1,329,145	-		ABZR87_RS22110	0.68	-0.2
1,329,213	+		ABZR87_RS22110	0.73	-0.5
1,329,213	+		ABZR87_RS22110	0.73	-0.7
1,329,214	-		ABZR87_RS22110	0.74	+0.1
1,329,214	-		ABZR87_RS22110	0.74	+0.4
1,329,214	-		ABZR87_RS22110	0.74	+0.7