Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS22000

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
1,307,459	+		ABZR87_RS21995	0.53	+0.7
1,307,459	+		ABZR87_RS21995	0.53	+0.8
1,307,604	+		ABZR87_RS21995	0.60	+0.9
1,307,604	+		ABZR87_RS21995	0.60	-0.2
1,308,136	+		ABZR87_RS21995	0.88	+0.1
1,308,137	-		ABZR87_RS21995	0.88	-0.4
1,308,359	+				-1.1
1,308,360	-				-1.4
1,308,375	+				-0.9
1,308,375	+				+0.4
1,308,700	+		ABZR87_RS22000	0.72	-2.2
1,308,700	+		ABZR87_RS22000	0.72	-1.0
1,308,701	-		ABZR87_RS22000	0.72	-0.2
1,309,078	+		ABZR87_RS22010	0.28	-0.4
1,309,079	-		ABZR87_RS22010	0.28	+1.7
1,309,171	+		ABZR87_RS22010	0.54	+0.4
1,309,172	-		ABZR87_RS22010	0.54	+0.4
1,309,172	-		ABZR87_RS22010	0.54	-0.4
1,309,172	-		ABZR87_RS22010	0.54	+0.3
1,309,522	-		ABZR87_RS22015	0.43	+1.0
1,309,548	+		ABZR87_RS22015	0.49	-0.7
1,309,659	-		ABZR87_RS22015	0.75	-1.2
1,309,735	-				+0.1
1,309,735	-				-1.0
1,309,768	+				-0.5
1,309,768	+				-0.5
1,309,769	-				+0.2
1,309,769	-				+0.5