Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS21795

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
1,273,539	+		ABZR87_RS21785	0.70	+0.1
1,273,539	+		ABZR87_RS21785	0.70	+1.8
1,273,539	+		ABZR87_RS21785	0.70	-1.9
1,273,539	+		ABZR87_RS21785	0.70	-1.1
1,273,539	+		ABZR87_RS21785	0.70	-0.1
1,273,539	+		ABZR87_RS21785	0.70	+0.5
1,273,540	-		ABZR87_RS21785	0.71	-1.2
1,273,540	-		ABZR87_RS21785	0.71	-0.0
1,273,540	-		ABZR87_RS21785	0.71	-0.5
1,273,540	-		ABZR87_RS21785	0.71	-1.0
1,273,631	+		ABZR87_RS21785	0.77	+0.3
1,273,640	+		ABZR87_RS21785	0.78	-0.8
1,273,640	+		ABZR87_RS21785	0.78	-0.3
1,273,640	+		ABZR87_RS21785	0.78	+0.6
1,273,641	-		ABZR87_RS21785	0.78	+0.6
1,273,641	-		ABZR87_RS21785	0.78	+0.4
1,273,641	-		ABZR87_RS21785	0.78	+1.0
1,273,641	-		ABZR87_RS21785	0.78	-0.3
1,273,641	-		ABZR87_RS21785	0.78	+0.1
1,273,641	-		ABZR87_RS21785	0.78	+0.4
1,273,641	-		ABZR87_RS21785	0.78	+1.0
1,273,641	-		ABZR87_RS21785	0.78	+0.1
1,273,836	-				+0.5
1,273,836	-				+0.0
1,273,836	-				+1.6
1,273,836	-				-0.9
1,273,836	-				+0.1
1,273,836	-				-0.0
1,273,887	-				+2.2
1,273,887	-				+1.0
1,273,960	+				-0.9
1,273,961	-				-0.3
1,273,961	-				+0.3
1,274,277	+		ABZR87_RS21790	0.54	-0.0
1,274,277	+		ABZR87_RS21790	0.54	+0.3
1,274,277	+		ABZR87_RS21790	0.54	+0.4
1,274,278	-		ABZR87_RS21790	0.54	-0.9
1,274,278	-		ABZR87_RS21790	0.54	+0.4
1,274,278	-		ABZR87_RS21790	0.54	+0.9
1,274,485	-				+0.6
1,274,630	-		ABZR87_RS21795	0.13	-0.2
1,274,732	-		ABZR87_RS21795	0.27	-0.8
1,274,794	+		ABZR87_RS21795	0.35	-0.7
1,274,795	-		ABZR87_RS21795	0.35	-0.8
1,274,795	-		ABZR87_RS21795	0.35	-2.1
1,274,795	-		ABZR87_RS21795	0.35	+0.3
1,274,795	-		ABZR87_RS21795	0.35	-1.6
1,274,959	+		ABZR87_RS21795	0.58	-2.0
1,274,959	+		ABZR87_RS21795	0.58	-0.1
1,274,959	+		ABZR87_RS21795	0.58	+0.3
1,274,960	-		ABZR87_RS21795	0.58	-1.4
1,274,960	-		ABZR87_RS21795	0.58	-0.0
1,275,203	+				-0.4
1,275,204	-				+0.4
1,275,303	+				+0.5
1,275,303	+				-0.7
1,275,431	+				+0.2
1,275,431	+				-0.0
1,275,431	+				+0.4
1,275,431	+				+0.0
1,275,432	-				+0.8
1,275,432	-				+0.3
1,275,463	+				+0.4
1,275,463	+				+1.4
1,275,580	+		ABZR87_RS21800	0.21	+0.1
1,275,649	+		ABZR87_RS21800	0.27	+0.2
1,275,650	-		ABZR87_RS21800	0.27	+0.3
1,275,934	+		ABZR87_RS21800	0.55	+0.2
1,275,935	-		ABZR87_RS21800	0.55	-0.0
1,275,935	-		ABZR87_RS21800	0.55	-1.0
1,275,935	-		ABZR87_RS21800	0.55	+0.0
1,276,186	+		ABZR87_RS21800	0.79	+1.3
1,276,187	-		ABZR87_RS21800	0.79	-0.1