Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS21765

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
1,266,922	+		ABZR87_RS21760	0.69	-1.2
1,266,922	+		ABZR87_RS21760	0.69	+0.0
1,266,923	-		ABZR87_RS21760	0.69	-0.4
1,267,013	+		ABZR87_RS21760	0.83	-0.5
1,267,114	+				+0.5
1,267,114	+				-0.1
1,267,115	-				-0.6
1,267,160	-				-0.6
1,267,363	+				-2.4
1,267,364	-				-2.0
1,267,409	-				-1.1
1,267,409	-				+0.1
1,267,409	-				+0.8
1,267,532	+				+0.5
1,267,672	+				-2.2
1,267,672	+				+0.3
1,267,672	+				+0.1
1,267,887	-				-0.2
1,267,966	+				+0.5
1,268,108	+		ABZR87_RS21765	0.15	-0.8
1,268,108	+		ABZR87_RS21765	0.15	-1.0
1,268,109	-		ABZR87_RS21765	0.15	-0.0
1,268,109	-		ABZR87_RS21765	0.15	-0.3
1,268,109	-		ABZR87_RS21765	0.15	-1.9
1,268,129	+		ABZR87_RS21765	0.16	+0.4
1,268,130	-		ABZR87_RS21765	0.16	+1.6
1,268,243	+		ABZR87_RS21765	0.22	-0.8
1,268,243	+		ABZR87_RS21765	0.22	+0.4
1,268,243	+		ABZR87_RS21765	0.22	+0.6
1,268,331	-		ABZR87_RS21765	0.27	-1.2
1,268,331	-		ABZR87_RS21765	0.27	+0.5
1,268,382	-		ABZR87_RS21765	0.30	-0.8
1,268,834	+		ABZR87_RS21765	0.54	+0.2
1,268,834	+		ABZR87_RS21765	0.54	-1.6
1,268,834	+		ABZR87_RS21765	0.54	-0.1
1,268,906	+		ABZR87_RS21765	0.58	-0.7
1,268,944	-		ABZR87_RS21765	0.60	-0.5
1,268,944	-		ABZR87_RS21765	0.60	-1.0
1,269,076	-		ABZR87_RS21765	0.67	-1.5
1,269,131	+		ABZR87_RS21765	0.70	+1.1
1,269,132	-		ABZR87_RS21765	0.70	-1.0
1,269,132	-		ABZR87_RS21765	0.70	-0.6
1,269,350	+		ABZR87_RS21765	0.82	+0.4
1,269,350	+		ABZR87_RS21765	0.82	-0.4
1,269,350	+		ABZR87_RS21765	0.82	-0.5
1,269,350	+		ABZR87_RS21765	0.82	+0.5
1,269,351	-		ABZR87_RS21765	0.82	-1.6
1,269,351	-		ABZR87_RS21765	0.82	+0.7
1,269,351	-		ABZR87_RS21765	0.82	+0.2
1,269,351	-		ABZR87_RS21765	0.82	-0.5
1,269,351	-		ABZR87_RS21765	0.82	+0.7
1,269,354	-		ABZR87_RS21765	0.82	-0.2
1,269,669	+				-0.0
1,269,669	+				+1.1
1,269,670	-				+0.5
1,269,670	-				-0.4
1,269,670	-				-0.9
1,269,670	-				+0.1
1,269,675	+				-0.8
1,269,676	-				-1.0
1,269,676	-				+0.6
1,269,676	-				-1.1
1,269,676	-				-0.5
1,269,676	-				-2.3
1,269,676	-				+0.1
1,269,676	-				+0.1
1,269,676	-				-1.7
1,269,696	+				-0.1
1,269,696	+				-0.2
1,269,696	+				+0.1
1,269,697	-				+0.7
1,269,697	-				+0.1
1,269,762	+		ABZR87_RS21770	0.10	-1.1
1,269,762	+		ABZR87_RS21770	0.10	+0.8
1,269,762	+		ABZR87_RS21770	0.10	-0.4
1,269,762	+		ABZR87_RS21770	0.10	-0.2
1,269,762	+		ABZR87_RS21770	0.10	+1.1
1,269,778	-		ABZR87_RS21770	0.12	+1.7
1,269,858	+		ABZR87_RS21770	0.20	-2.0
1,270,281	+		ABZR87_RS21770	0.65	+0.3
1,270,282	-		ABZR87_RS21770	0.65	-0.2
1,270,282	-		ABZR87_RS21770	0.65	-0.7
1,270,300	+		ABZR87_RS21770	0.67	-0.4
1,270,300	+		ABZR87_RS21770	0.67	+1.1
1,270,301	-		ABZR87_RS21770	0.67	-0.5
1,270,301	-		ABZR87_RS21770	0.67	+0.5
1,270,301	-		ABZR87_RS21770	0.67	-1.7
1,270,301	-		ABZR87_RS21770	0.67	-1.4
1,270,338	+		ABZR87_RS21770	0.71	-0.3
1,270,338	+		ABZR87_RS21770	0.71	+0.3
1,270,339	-		ABZR87_RS21770	0.71	-0.0
1,270,359	+		ABZR87_RS21770	0.74	-0.8
1,270,624	-				-0.7
1,270,667	-				+0.3
1,270,667	-				-0.6