Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS21760

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
1,265,485	+		ABZR87_RS21755	0.11	+0.1
1,265,486	-		ABZR87_RS21755	0.11	-0.6
1,265,486	-		ABZR87_RS21755	0.11	-0.8
1,265,750	+		ABZR87_RS21755	0.35	-0.1
1,265,750	+		ABZR87_RS21755	0.35	-1.3
1,265,751	-		ABZR87_RS21755	0.35	-1.2
1,265,863	+		ABZR87_RS21755	0.45	-0.6
1,265,863	+		ABZR87_RS21755	0.45	+0.1
1,265,864	-		ABZR87_RS21755	0.45	-0.3
1,266,275	-		ABZR87_RS21755	0.81	-0.0
1,266,753	+		ABZR87_RS21760	0.43	-0.6
1,266,753	+		ABZR87_RS21760	0.43	-0.5
1,266,754	-		ABZR87_RS21760	0.43	-0.4
1,266,922	+		ABZR87_RS21760	0.69	-1.2
1,266,922	+		ABZR87_RS21760	0.69	+0.0
1,266,923	-		ABZR87_RS21760	0.69	-0.4
1,267,013	+		ABZR87_RS21760	0.83	-0.5
1,267,114	+				+0.5
1,267,114	+				-0.1
1,267,115	-				-0.6
1,267,160	-				-0.6
1,267,363	+				-2.4
1,267,364	-				-2.0
1,267,409	-				-1.1
1,267,409	-				+0.1
1,267,409	-				+0.8
1,267,532	+				+0.5
1,267,672	+				-2.2
1,267,672	+				+0.3
1,267,672	+				+0.1
1,267,887	-				-0.2
1,267,966	+				+0.5
1,268,108	+		ABZR87_RS21765	0.15	-0.8
1,268,108	+		ABZR87_RS21765	0.15	-1.0
1,268,109	-		ABZR87_RS21765	0.15	-0.0
1,268,109	-		ABZR87_RS21765	0.15	-0.3
1,268,109	-		ABZR87_RS21765	0.15	-1.9