Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS20835

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
1,058,442	-				+0.8
1,058,442	-				-1.2
1,058,442	-				+0.2
1,058,718	-		ABZR87_RS20830	0.34	+0.6
1,058,718	-		ABZR87_RS20830	0.34	+0.2
1,058,791	+		ABZR87_RS20830	0.44	-0.5
1,058,792	-		ABZR87_RS20830	0.44	-0.2
1,058,792	-		ABZR87_RS20830	0.44	+0.4
1,058,902	+		ABZR87_RS20830	0.58	+0.2
1,058,903	-		ABZR87_RS20830	0.59	+0.1
1,059,006	-		ABZR87_RS20830	0.72	-0.1
1,059,145	+				+0.4
1,059,146	-				-0.8
1,059,218	-				-0.2
1,059,492	+		ABZR87_RS20835	0.28	+3.3
1,059,493	-		ABZR87_RS20835	0.28	-0.2
1,059,663	+		ABZR87_RS20835	0.48	+0.7
1,059,663	+		ABZR87_RS20835	0.48	-0.7
1,059,663	+		ABZR87_RS20835	0.48	-0.1
1,059,664	-		ABZR87_RS20835	0.48	+0.6
1,059,664	-		ABZR87_RS20835	0.48	+0.6
1,059,691	-		ABZR87_RS20835	0.51	-0.5
1,059,691	-		ABZR87_RS20835	0.51	+0.3
1,059,691	-		ABZR87_RS20835	0.51	+1.6
1,059,702	+		ABZR87_RS20835	0.53	+1.0
1,059,890	+		ABZR87_RS20835	0.75	-2.1
1,059,930	+		ABZR87_RS20835	0.80	-2.1
1,059,930	+		ABZR87_RS20835	0.80	-0.0
1,059,930	+		ABZR87_RS20835	0.80	+0.3
1,059,931	-		ABZR87_RS20835	0.80	+0.2
1,059,931	-		ABZR87_RS20835	0.80	+1.3
1,060,023	+				-0.3
1,060,024	-				+0.1
1,060,024	-				-0.5
1,060,108	+				+0.3
1,060,109	-				+0.6
1,060,318	+		ABZR87_RS20840	0.23	-2.1
1,060,318	+		ABZR87_RS20840	0.23	+0.2
1,060,318	+		ABZR87_RS20840	0.23	-0.9
1,060,402	+		ABZR87_RS20840	0.32	-1.7
1,060,403	-		ABZR87_RS20840	0.32	+1.3
1,060,403	-		ABZR87_RS20840	0.32	-1.0
1,060,403	-		ABZR87_RS20840	0.32	-0.4
1,060,403	-		ABZR87_RS20840	0.32	-0.5
1,060,507	+		ABZR87_RS20840	0.44	+0.5
1,060,508	-		ABZR87_RS20840	0.44	+2.0
1,060,635	-		ABZR87_RS20840	0.58	-0.3
1,060,668	+		ABZR87_RS20840	0.61	-0.5
1,060,669	-		ABZR87_RS20840	0.61	-1.4
1,060,669	-		ABZR87_RS20840	0.61	-0.3
1,060,669	-		ABZR87_RS20840	0.61	-1.3
1,060,669	-		ABZR87_RS20840	0.61	+0.6
1,060,693	+		ABZR87_RS20840	0.64	-0.3
1,060,693	+		ABZR87_RS20840	0.64	-0.1
1,060,693	+		ABZR87_RS20840	0.64	-0.4
1,060,693	+		ABZR87_RS20840	0.64	-2.4
1,060,694	-		ABZR87_RS20840	0.64	-0.3
1,060,694	-		ABZR87_RS20840	0.64	-0.9
1,060,694	-		ABZR87_RS20840	0.64	-1.3
1,060,912	-		ABZR87_RS20840	0.88	+0.1
1,061,103	+				-1.9