Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS20820

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
1,056,043	-		ABZR87_RS20815	0.26	-0.6
1,056,048	+		ABZR87_RS20815	0.27	+0.8
1,056,048	+		ABZR87_RS20815	0.27	+0.1
1,056,048	+		ABZR87_RS20815	0.27	-0.3
1,056,048	+		ABZR87_RS20815	0.27	-0.3
1,056,049	-		ABZR87_RS20815	0.27	+2.1
1,056,049	-		ABZR87_RS20815	0.27	+0.2
1,056,171	+		ABZR87_RS20815	0.41	-0.5
1,056,171	+		ABZR87_RS20815	0.41	-0.9
1,056,253	-		ABZR87_RS20815	0.51	+0.6
1,056,283	-		ABZR87_RS20815	0.55	-0.3
1,056,283	-		ABZR87_RS20815	0.55	+0.0
1,056,283	-		ABZR87_RS20815	0.55	+0.5
1,056,283	-		ABZR87_RS20815	0.55	-0.5
1,056,348	+		ABZR87_RS20815	0.62	-0.4
1,056,348	+		ABZR87_RS20815	0.62	+0.8
1,056,348	+		ABZR87_RS20815	0.62	-1.0
1,056,349	-		ABZR87_RS20815	0.63	+0.2
1,056,546	+		ABZR87_RS20815	0.86	+0.4
1,056,546	+		ABZR87_RS20815	0.86	+0.7
1,056,546	+		ABZR87_RS20815	0.86	+0.8
1,056,547	-		ABZR87_RS20815	0.86	-0.3
1,056,547	-		ABZR87_RS20815	0.86	-0.0
1,056,547	-		ABZR87_RS20815	0.86	+0.8
1,056,878	+				+0.1
1,056,921	-				-1.0
1,056,921	-				-0.6
1,056,921	-				+0.0
1,057,017	+				+0.4
1,057,017	+				-0.7
1,057,017	+				+0.2
1,057,018	-				-2.8
1,057,018	-				+0.4
1,057,018	-				-2.8
1,057,018	-				-0.3
1,057,042	+		ABZR87_RS20820	0.10	-0.1
1,057,042	+		ABZR87_RS20820	0.10	-0.9
1,057,315	+		ABZR87_RS20820	0.37	-0.2
1,057,316	-		ABZR87_RS20820	0.37	-1.4
1,057,336	+		ABZR87_RS20820	0.39	-0.8
1,057,485	+		ABZR87_RS20820	0.54	-0.6
1,057,486	-		ABZR87_RS20820	0.54	+0.6
1,057,486	-		ABZR87_RS20820	0.54	-0.3
1,058,192	+		ABZR87_RS20825	0.41	+1.0
1,058,192	+		ABZR87_RS20825	0.41	-0.3
1,058,192	+		ABZR87_RS20825	0.41	-1.1
1,058,192	+		ABZR87_RS20825	0.41	+0.6
1,058,193	-		ABZR87_RS20825	0.41	+0.3
1,058,193	-		ABZR87_RS20825	0.41	-1.9
1,058,442	-				+0.8
1,058,442	-				-1.2
1,058,442	-				+0.2
1,058,718	-		ABZR87_RS20830	0.34	+0.6
1,058,718	-		ABZR87_RS20830	0.34	+0.2
1,058,791	+		ABZR87_RS20830	0.44	-0.5
1,058,792	-		ABZR87_RS20830	0.44	-0.2
1,058,792	-		ABZR87_RS20830	0.44	+0.4
1,058,902	+		ABZR87_RS20830	0.58	+0.2
1,058,903	-		ABZR87_RS20830	0.59	+0.1