Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS15505

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
3,262,884	+		ABZR87_RS15500	0.17	+0.7
3,262,923	+		ABZR87_RS15500	0.20	+0.3
3,262,924	-		ABZR87_RS15500	0.21	+0.5
3,262,992	-		ABZR87_RS15500	0.27	+2.0
3,263,299	+		ABZR87_RS15500	0.56	+0.1
3,263,300	-		ABZR87_RS15500	0.56	+0.9
3,263,321	+		ABZR87_RS15500	0.58	+2.1
3,263,322	-		ABZR87_RS15500	0.58	+0.8
3,263,324	+		ABZR87_RS15500	0.58	+0.6
3,263,384	+		ABZR87_RS15500	0.64	+0.9
3,263,385	-		ABZR87_RS15500	0.64	+2.0
3,263,385	-		ABZR87_RS15500	0.64	+0.7
3,263,385	-		ABZR87_RS15500	0.64	+0.9
3,263,453	+		ABZR87_RS15500	0.70	+1.4
3,263,466	+		ABZR87_RS15500	0.71	+3.1
3,263,478	+		ABZR87_RS15500	0.72	+1.9
3,263,478	+		ABZR87_RS15500	0.72	+0.1
3,263,478	+		ABZR87_RS15500	0.72	+1.0
3,263,478	+		ABZR87_RS15500	0.72	+1.3
3,263,478	+		ABZR87_RS15500	0.72	+3.2
3,263,479	-		ABZR87_RS15500	0.72	-0.4
3,263,546	+		ABZR87_RS15500	0.79	+0.5
3,263,739	-				+0.6
3,263,781	+				+1.7
3,263,781	+				+1.2
3,263,781	+				+1.2
3,263,782	-				+0.4
3,263,787	+				+0.7
3,263,787	+				+1.4
3,263,793	+				+0.9
3,263,794	-				-1.3
3,263,857	+				+1.5
3,263,858	-				+0.3
3,263,858	-				+0.7
3,263,858	-				+0.2
3,263,858	-				-0.9
3,263,863	+				+0.2
3,263,863	+				+0.7
3,263,864	-				-1.2
3,263,864	-				-1.0
3,263,864	-				-1.0
3,264,363	-		ABZR87_RS15505	0.14	-1.0
3,267,386	-				+0.1
3,267,464	+				-0.3
3,267,467	-				-0.4
3,267,478	-				-0.4
3,267,539	+				+0.8
3,267,540	-				-1.0
3,267,540	-				-0.2
3,267,549	+				+0.6
3,267,550	-				+0.1
3,267,550	-				-0.9
3,267,945	+		ABZR87_RS15510	0.49	+0.2
3,267,945	+		ABZR87_RS15510	0.49	+0.2
3,267,945	+		ABZR87_RS15510	0.49	+0.1
3,267,946	-		ABZR87_RS15510	0.50	-1.3
3,267,946	-		ABZR87_RS15510	0.50	-0.0
3,267,946	-		ABZR87_RS15510	0.50	-0.3
3,267,984	+		ABZR87_RS15510	0.54	-0.5
3,267,985	-		ABZR87_RS15510	0.54	-0.2
3,267,985	-		ABZR87_RS15510	0.54	+0.6
3,267,985	-		ABZR87_RS15510	0.54	+0.7
3,267,985	-		ABZR87_RS15510	0.54	+0.0
3,267,985	-		ABZR87_RS15510	0.54	-0.0
3,267,985	-		ABZR87_RS15510	0.54	-0.6
3,268,135	-		ABZR87_RS15510	0.72	-1.3
3,268,135	-		ABZR87_RS15510	0.72	+0.2
3,268,161	+		ABZR87_RS15510	0.75	+0.9
3,268,162	-		ABZR87_RS15510	0.75	-0.4
3,268,188	+		ABZR87_RS15510	0.78	-0.6
3,268,188	+		ABZR87_RS15510	0.78	+0.4
3,268,188	+		ABZR87_RS15510	0.78	+0.0
3,268,189	-		ABZR87_RS15510	0.78	-0.4
3,268,189	-		ABZR87_RS15510	0.78	+0.7
3,268,189	-		ABZR87_RS15510	0.78	-2.3
3,268,314	+				-0.4
3,268,314	+				-0.8
3,268,314	+				-0.8
3,268,314	+				+0.7
3,268,314	+				+0.8
3,268,315	-				-1.3
3,268,315	-				+0.6
3,268,315	-				+0.4
3,268,315	-				-0.5
3,268,315	-				+1.1