Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS15480

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
3,258,885	-				+1.6
3,258,885	-				+1.7
3,259,132	+		ABZR87_RS15480	0.15	+0.7
3,259,132	+		ABZR87_RS15480	0.15	+2.2
3,259,171	+		ABZR87_RS15480	0.20	+1.7
3,259,172	-		ABZR87_RS15480	0.20	+2.7
3,259,172	-		ABZR87_RS15480	0.20	+1.6
3,259,172	-		ABZR87_RS15480	0.20	+1.1
3,259,172	-		ABZR87_RS15480	0.20	+2.4
3,259,172	-		ABZR87_RS15480	0.20	+1.4
3,259,189	-		ABZR87_RS15480	0.22	+0.8
3,259,283	-		ABZR87_RS15480	0.34	+1.0
3,259,283	-		ABZR87_RS15480	0.34	+1.1
3,259,334	+		ABZR87_RS15480	0.41	+1.2
3,259,408	+		ABZR87_RS15480	0.50	+0.5
3,259,408	+		ABZR87_RS15480	0.50	+0.8
3,259,408	+		ABZR87_RS15480	0.50	+1.3
3,259,408	+		ABZR87_RS15480	0.50	+1.3
3,259,409	-		ABZR87_RS15480	0.50	+1.0
3,259,409	-		ABZR87_RS15480	0.50	+1.1
3,259,409	-		ABZR87_RS15480	0.50	+1.0
3,259,409	-		ABZR87_RS15480	0.50	+0.3
3,259,465	+		ABZR87_RS15480	0.57	+0.3
3,259,465	+		ABZR87_RS15480	0.57	+1.2
3,259,465	+		ABZR87_RS15480	0.57	+1.6
3,259,466	-		ABZR87_RS15480	0.58	+1.4
3,259,466	-		ABZR87_RS15480	0.58	+0.5
3,259,466	-		ABZR87_RS15480	0.58	+2.2
3,259,466	-		ABZR87_RS15480	0.58	+1.3
3,259,486	+		ABZR87_RS15480	0.60	+2.3
3,259,486	+		ABZR87_RS15480	0.60	+1.9
3,259,487	-		ABZR87_RS15480	0.60	+2.6
3,259,555	+		ABZR87_RS15480	0.69	+1.0
3,259,555	+		ABZR87_RS15480	0.69	+1.4
3,259,555	+		ABZR87_RS15480	0.69	+1.3
3,259,555	+		ABZR87_RS15480	0.69	+1.5
3,259,556	-		ABZR87_RS15480	0.69	+1.5
3,259,562	-		ABZR87_RS15480	0.70	-0.8
3,259,609	+		ABZR87_RS15480	0.76	+1.5
3,259,609	+		ABZR87_RS15480	0.76	+1.9
3,259,610	-		ABZR87_RS15480	0.76	+3.1
3,259,610	-		ABZR87_RS15480	0.76	+0.6
3,259,610	-		ABZR87_RS15480	0.76	+0.6
3,259,610	-		ABZR87_RS15480	0.76	+0.3
3,259,741	+				+1.2
3,259,741	+				+0.9
3,259,742	-				+2.3
3,259,742	-				+0.5
3,259,776	+				+0.8
3,259,895	+				+1.3
3,259,895	+				+1.6
3,259,895	+				+1.2
3,259,895	+				+1.3
3,259,896	-				+1.5
3,259,896	-				+1.7
3,259,936	+		ABZR87_RS15485	0.15	+1.9
3,259,936	+		ABZR87_RS15485	0.15	+1.6
3,259,937	-		ABZR87_RS15485	0.15	+1.4
3,259,937	-		ABZR87_RS15485	0.15	+1.4
3,259,991	+		ABZR87_RS15485	0.21	+0.8
3,260,207	+		ABZR87_RS15485	0.47	+1.5
3,260,379	-		ABZR87_RS15485	0.67	+1.6
3,260,604	+				+1.5
3,260,605	-				+1.7
3,260,606	+				+1.4
3,260,606	+				+1.3
3,260,606	+				+1.6
3,260,607	-				+2.4
3,260,607	-				+3.2
3,260,607	-				+1.7
3,260,607	-				+2.4
3,260,607	-				+1.6
3,260,607	-				+1.6
3,260,607	-				+1.7
3,260,614	-				+1.4
3,260,682	+				+1.3
3,260,689	-				+1.4
3,260,689	-				+1.2
3,260,689	-				+1.4
3,260,691	+				+1.5
3,260,692	-				-1.6
3,260,763	+		ABZR87_RS15490	0.16	+0.9
3,260,763	+		ABZR87_RS15490	0.16	+1.7
3,260,763	+		ABZR87_RS15490	0.16	+0.8
3,260,763	+		ABZR87_RS15490	0.16	+1.8
3,260,763	+		ABZR87_RS15490	0.16	+1.1
3,260,763	+		ABZR87_RS15490	0.16	+1.7
3,260,763	+		ABZR87_RS15490	0.16	+1.7
3,260,763	+		ABZR87_RS15490	0.16	+1.3
3,260,764	-		ABZR87_RS15490	0.16	+1.4
3,260,764	-		ABZR87_RS15490	0.16	+2.0
3,260,764	-		ABZR87_RS15490	0.16	+0.4
3,260,764	-		ABZR87_RS15490	0.16	-0.9
3,260,764	-		ABZR87_RS15490	0.16	+2.1
3,260,764	-		ABZR87_RS15490	0.16	+1.9
3,260,764	-		ABZR87_RS15490	0.16	+2.5
3,260,764	-		ABZR87_RS15490	0.16	+1.3
3,260,764	-		ABZR87_RS15490	0.16	+2.2
3,260,764	-		ABZR87_RS15490	0.16	+1.8
3,260,764	-		ABZR87_RS15490	0.16	+1.4
3,260,767	+		ABZR87_RS15490	0.16	+0.8
3,260,767	+		ABZR87_RS15490	0.16	+2.5
3,260,767	+		ABZR87_RS15490	0.16	+2.7
3,260,767	+		ABZR87_RS15490	0.16	+1.4