Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS14990

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
3,160,780	+		ABZR87_RS14985	0.24	+0.6
3,160,780	+		ABZR87_RS14985	0.24	-0.8
3,160,780	+		ABZR87_RS14985	0.24	-0.1
3,160,822	+		ABZR87_RS14985	0.28	-0.2
3,160,822	+		ABZR87_RS14985	0.28	+0.4
3,160,822	+		ABZR87_RS14985	0.28	-0.4
3,160,822	+		ABZR87_RS14985	0.28	+0.0
3,160,822	+		ABZR87_RS14985	0.28	+0.1
3,160,823	-		ABZR87_RS14985	0.28	-3.3
3,160,823	-		ABZR87_RS14985	0.28	-1.0
3,160,871	-		ABZR87_RS14985	0.34	+0.3
3,161,111	-		ABZR87_RS14985	0.59	+0.1
3,161,128	+		ABZR87_RS14985	0.61	+0.7
3,161,128	+		ABZR87_RS14985	0.61	-0.5
3,161,128	+		ABZR87_RS14985	0.61	-1.0
3,161,210	-		ABZR87_RS14985	0.69	-0.0
3,161,210	-		ABZR87_RS14985	0.69	-0.7
3,161,210	-		ABZR87_RS14985	0.69	-0.6
3,161,316	+		ABZR87_RS14985	0.80	-0.2
3,161,316	+		ABZR87_RS14985	0.80	-0.2
3,161,317	-		ABZR87_RS14985	0.80	+0.8
3,161,357	-		ABZR87_RS14985	0.85	+0.6
3,161,513	+				+0.7
3,161,513	+				+0.1
3,161,513	+				+1.0
3,161,514	-				-0.1
3,161,514	-				+0.7
3,161,730	+		ABZR87_RS14990	0.14	+0.3
3,161,731	-		ABZR87_RS14990	0.14	-0.2
3,161,851	-		ABZR87_RS14990	0.25	-0.5
3,161,875	-		ABZR87_RS14990	0.27	-0.5
3,161,886	+		ABZR87_RS14990	0.28	+0.0
3,161,908	-		ABZR87_RS14990	0.31	+0.4
3,161,947	-		ABZR87_RS14990	0.34	+0.1
3,162,129	+		ABZR87_RS14990	0.52	-1.5
3,162,130	-		ABZR87_RS14990	0.52	-0.2
3,162,130	-		ABZR87_RS14990	0.52	+0.1
3,162,130	-		ABZR87_RS14990	0.52	+0.3
3,162,239	+		ABZR87_RS14990	0.62	-0.6
3,162,239	+		ABZR87_RS14990	0.62	+1.1
3,162,239	+		ABZR87_RS14990	0.62	-0.5
3,162,239	+		ABZR87_RS14990	0.62	+1.0
3,162,240	-		ABZR87_RS14990	0.62	+0.6
3,162,240	-		ABZR87_RS14990	0.62	+0.2
3,162,240	-		ABZR87_RS14990	0.62	-0.5
3,162,240	-		ABZR87_RS14990	0.62	-0.2
3,162,240	-		ABZR87_RS14990	0.62	-0.0
3,162,240	-		ABZR87_RS14990	0.62	-0.5
3,162,243	+		ABZR87_RS14990	0.63	-0.7
3,162,244	-		ABZR87_RS14990	0.63	-1.0
3,162,259	-		ABZR87_RS14990	0.64	+0.1
3,162,297	+		ABZR87_RS14990	0.68	-0.6
3,162,297	+		ABZR87_RS14990	0.68	+0.2
3,162,297	+		ABZR87_RS14990	0.68	-0.4
3,162,298	-		ABZR87_RS14990	0.68	+0.7
3,162,298	-		ABZR87_RS14990	0.68	+0.7
3,162,353	-		ABZR87_RS14990	0.73	+0.1
3,162,418	+		ABZR87_RS14990	0.79	-0.0
3,162,419	-		ABZR87_RS14990	0.80	+0.7
3,162,485	+		ABZR87_RS14990	0.86	-0.7
3,162,485	+		ABZR87_RS14990	0.86	+0.8
3,162,485	+		ABZR87_RS14990	0.86	+0.3
3,162,485	+		ABZR87_RS14990	0.86	+0.3
3,162,734	+		ABZR87_RS14995	0.19	-0.3
3,162,734	+		ABZR87_RS14995	0.19	+0.8
3,162,735	-		ABZR87_RS14995	0.19	+0.2
3,163,107	+				-0.4
3,163,108	-				-0.9
3,163,108	-				-0.5
3,163,193	-				-0.3
3,163,195	-				+0.3
3,163,209	+				-0.8
3,163,210	-				-1.7
3,163,210	-				-0.7
3,163,210	-				+0.5
3,163,210	-				+0.1
3,163,210	-				+0.3
3,163,395	-		ABZR87_RS15000	0.21	+0.7
3,163,517	+		ABZR87_RS15000	0.38	+0.2
3,163,526	+		ABZR87_RS15000	0.39	-0.5
3,163,526	+		ABZR87_RS15000	0.39	-1.7
3,163,526	+		ABZR87_RS15000	0.39	-0.4
3,163,526	+		ABZR87_RS15000	0.39	-0.4
3,163,527	-		ABZR87_RS15000	0.39	+0.4
3,163,527	-		ABZR87_RS15000	0.39	-0.2
3,163,527	-		ABZR87_RS15000	0.39	+0.6
3,163,527	-		ABZR87_RS15000	0.39	+0.1
3,163,527	-		ABZR87_RS15000	0.39	-0.7
3,163,550	+		ABZR87_RS15000	0.42	+0.7
3,163,550	+		ABZR87_RS15000	0.42	-0.4
3,163,550	+		ABZR87_RS15000	0.42	+0.2
3,163,551	-		ABZR87_RS15000	0.42	-0.1