Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS14980

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
3,158,426	+		ABZR87_RS14970	0.75	+0.2
3,158,426	+		ABZR87_RS14970	0.75	-0.7
3,158,661	-				+0.7
3,158,826	+		ABZR87_RS14975	0.17	-1.5
3,158,826	+		ABZR87_RS14975	0.17	-0.0
3,158,827	-		ABZR87_RS14975	0.17	-1.2
3,158,827	-		ABZR87_RS14975	0.17	-0.2
3,158,827	-		ABZR87_RS14975	0.17	+1.1
3,158,935	+		ABZR87_RS14975	0.38	+0.3
3,158,935	+		ABZR87_RS14975	0.38	+0.4
3,158,936	-		ABZR87_RS14975	0.38	-0.9
3,158,936	-		ABZR87_RS14975	0.38	-1.0
3,158,961	+		ABZR87_RS14975	0.43	-2.1
3,158,961	+		ABZR87_RS14975	0.43	+1.1
3,158,962	-		ABZR87_RS14975	0.43	-0.2
3,158,962	-		ABZR87_RS14975	0.43	+0.5
3,158,962	-		ABZR87_RS14975	0.43	-0.1
3,158,962	-		ABZR87_RS14975	0.43	-0.3
3,159,047	+		ABZR87_RS14975	0.59	-0.6
3,159,076	-		ABZR87_RS14975	0.65	-0.1
3,159,115	+		ABZR87_RS14975	0.72	+0.1
3,159,116	-		ABZR87_RS14975	0.72	+0.1
3,159,116	-		ABZR87_RS14975	0.72	+0.8
3,159,735	+		ABZR87_RS14980	0.44	-1.3
3,159,735	+		ABZR87_RS14980	0.44	-0.7
3,159,736	-		ABZR87_RS14980	0.44	-0.2
3,159,843	+		ABZR87_RS14980	0.54	+0.0
3,159,880	+		ABZR87_RS14980	0.58	-1.0
3,159,881	-		ABZR87_RS14980	0.58	-1.7
3,160,228	+				-0.6
3,160,229	-				+0.2
3,160,229	-				-0.6
3,160,780	+		ABZR87_RS14985	0.24	+0.6
3,160,780	+		ABZR87_RS14985	0.24	-0.8
3,160,780	+		ABZR87_RS14985	0.24	-0.1
3,160,822	+		ABZR87_RS14985	0.28	-0.2
3,160,822	+		ABZR87_RS14985	0.28	+0.4
3,160,822	+		ABZR87_RS14985	0.28	-0.4
3,160,822	+		ABZR87_RS14985	0.28	+0.0
3,160,822	+		ABZR87_RS14985	0.28	+0.1
3,160,823	-		ABZR87_RS14985	0.28	-3.3
3,160,823	-		ABZR87_RS14985	0.28	-1.0
3,160,871	-		ABZR87_RS14985	0.34	+0.3
3,161,111	-		ABZR87_RS14985	0.59	+0.1
3,161,128	+		ABZR87_RS14985	0.61	+0.7
3,161,128	+		ABZR87_RS14985	0.61	-0.5
3,161,128	+		ABZR87_RS14985	0.61	-1.0
3,161,210	-		ABZR87_RS14985	0.69	-0.0
3,161,210	-		ABZR87_RS14985	0.69	-0.7
3,161,210	-		ABZR87_RS14985	0.69	-0.6