Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS14540

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
3,070,571	+		ABZR87_RS14530	0.79	-1.1
3,070,571	+		ABZR87_RS14530	0.79	-0.0
3,070,876	+				-1.6
3,070,876	+				-1.3
3,070,876	+				-0.8
3,070,876	+				+0.2
3,070,877	-				-2.8
3,070,877	-				-0.2
3,070,877	-				+0.2
3,070,897	+		ABZR87_RS14535	0.12	+0.4
3,070,898	-		ABZR87_RS14535	0.12	-0.4
3,070,942	+		ABZR87_RS14535	0.19	+0.5
3,070,943	-		ABZR87_RS14535	0.19	-1.8
3,071,036	+		ABZR87_RS14535	0.33	-0.1
3,071,037	-		ABZR87_RS14535	0.33	-0.1
3,071,167	+		ABZR87_RS14535	0.53	-0.4
3,071,167	+		ABZR87_RS14535	0.53	-1.9
3,071,168	-		ABZR87_RS14535	0.53	-1.0
3,071,168	-		ABZR87_RS14535	0.53	+1.1
3,071,329	+		ABZR87_RS14535	0.78	+0.7
3,071,330	-		ABZR87_RS14535	0.78	+1.0
3,071,373	-		ABZR87_RS14535	0.85	-0.1
3,071,484	+				+0.4
3,071,484	+				-0.5
3,071,484	+				+0.9
3,071,485	-				-0.4
3,071,485	-				+0.0
3,071,562	-				-0.7
3,071,562	-				-1.8
3,071,562	-				+0.2
3,071,931	+		ABZR87_RS14540	0.31	-0.5
3,071,931	+		ABZR87_RS14540	0.31	-0.3
3,071,931	+		ABZR87_RS14540	0.31	-2.8
3,071,931	+		ABZR87_RS14540	0.31	+1.4
3,071,931	+		ABZR87_RS14540	0.31	-1.8
3,071,931	+		ABZR87_RS14540	0.31	-0.9
3,071,932	-		ABZR87_RS14540	0.31	-0.3
3,072,086	+		ABZR87_RS14540	0.42	-0.3
3,072,180	+		ABZR87_RS14540	0.49	-1.4
3,072,181	-		ABZR87_RS14540	0.49	-2.1
3,072,449	+		ABZR87_RS14540	0.68	-1.7
3,072,449	+		ABZR87_RS14540	0.68	-1.5
3,072,450	-		ABZR87_RS14540	0.68	-0.6
3,072,628	-		ABZR87_RS14540	0.80	+0.1
3,072,628	-		ABZR87_RS14540	0.80	+0.5
3,072,828	+				+0.8
3,072,828	+				+2.0
3,072,828	+				-0.7
3,072,828	+				+1.7
3,072,829	-				-1.6
3,072,829	-				+0.5
3,072,829	-				-0.0
3,072,856	+				-0.6
3,072,916	+				-0.8
3,072,982	+				+0.1
3,072,982	+				-1.7
3,073,133	+				+1.0