Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS14170

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
2,993,278	+				-1.0
2,993,278	+				-0.5
2,993,278	+				-0.2
2,993,279	-				+0.3
2,993,279	-				-0.9
2,993,279	-				-1.9
2,993,282	-				+0.4
2,993,282	-				+0.1
2,993,282	-				+0.5
2,993,418	+				+0.6
2,993,418	+				+0.5
2,993,419	-				-0.8
2,993,568	+		ABZR87_RS14165	0.23	-1.4
2,993,569	-		ABZR87_RS14165	0.23	-0.0
2,993,644	+		ABZR87_RS14165	0.32	+0.1
2,993,644	+		ABZR87_RS14165	0.32	-0.1
2,993,644	+		ABZR87_RS14165	0.32	+0.5
2,993,644	+		ABZR87_RS14165	0.32	+0.3
2,993,644	+		ABZR87_RS14165	0.32	-0.4
2,993,645	-		ABZR87_RS14165	0.32	+0.1
2,993,645	-		ABZR87_RS14165	0.32	+0.0
2,993,645	-		ABZR87_RS14165	0.32	-0.8
2,993,645	-		ABZR87_RS14165	0.32	-1.2
2,993,645	-		ABZR87_RS14165	0.32	-0.0
2,993,645	-		ABZR87_RS14165	0.32	+0.2
2,993,645	-		ABZR87_RS14165	0.32	+0.2
2,993,645	-		ABZR87_RS14165	0.32	-0.0
2,993,645	-		ABZR87_RS14165	0.32	+0.0
2,993,659	+		ABZR87_RS14165	0.33	-0.6
2,993,660	-		ABZR87_RS14165	0.33	-0.6
2,993,670	-		ABZR87_RS14165	0.35	+0.3
2,993,762	+		ABZR87_RS14165	0.46	-0.2
2,993,763	-		ABZR87_RS14165	0.46	-0.9
2,993,763	-		ABZR87_RS14165	0.46	-0.4
2,993,763	-		ABZR87_RS14165	0.46	-0.2
2,993,763	-		ABZR87_RS14165	0.46	-0.9
2,993,815	+		ABZR87_RS14165	0.52	+1.4
2,993,816	-		ABZR87_RS14165	0.52	+1.3
2,993,816	-		ABZR87_RS14165	0.52	+0.5
2,993,816	-		ABZR87_RS14165	0.52	+0.9
2,993,816	-		ABZR87_RS14165	0.52	+1.0
2,993,816	-		ABZR87_RS14165	0.52	+0.1
2,993,816	-		ABZR87_RS14165	0.52	+0.8
2,993,834	+		ABZR87_RS14165	0.54	+1.7
2,993,834	+		ABZR87_RS14165	0.54	-0.3
2,993,835	-		ABZR87_RS14165	0.54	+0.1
2,994,039	+		ABZR87_RS14165	0.79	+0.4
2,994,039	+		ABZR87_RS14165	0.79	+0.6
2,994,039	+		ABZR87_RS14165	0.79	+0.6
2,994,040	-		ABZR87_RS14165	0.79	+0.9
2,994,136	-				-0.5
2,994,146	+				+0.1
2,994,146	+				+0.7
2,994,146	+				+1.0
2,994,146	+				+0.4
2,994,146	+				+0.2
2,994,147	-				-0.6
2,994,147	-				+0.1
2,994,147	-				+0.2
2,994,148	+				+0.6
2,994,148	+				+0.0
2,994,148	+				+0.6
2,994,149	-				-0.9
2,994,149	-				-0.2
2,994,149	-				+1.0
2,994,190	-				+2.0
2,994,190	-				-1.0
2,994,190	-				-2.1
2,994,248	+				-0.6
2,994,248	+				-0.0
2,994,248	+				+0.2
2,994,248	+				+1.6
2,994,249	-				-1.8
2,994,249	-				-1.9
2,994,249	-				-1.0
2,994,249	-				-0.9
2,995,041	+				-0.9
2,995,041	+				-0.4
2,995,042	-				-1.0
2,995,042	-				+0.1
2,995,180	+				+1.0
2,995,688	-		ABZR87_RS14180	0.12	+0.4
2,995,688	-		ABZR87_RS14180	0.12	+0.4
2,995,711	+		ABZR87_RS14180	0.17	+0.6
2,995,711	+		ABZR87_RS14180	0.17	+0.6
2,995,867	+		ABZR87_RS14180	0.47	+0.7
2,995,868	-		ABZR87_RS14180	0.47	+0.8
2,995,888	+		ABZR87_RS14180	0.51	+0.8
2,995,894	+		ABZR87_RS14180	0.53	+0.1
2,995,894	+		ABZR87_RS14180	0.53	+0.5
2,995,895	-		ABZR87_RS14180	0.53	+0.4
2,995,895	-		ABZR87_RS14180	0.53	-0.3
2,996,032	+		ABZR87_RS14180	0.80	+0.2
2,996,032	+		ABZR87_RS14180	0.80	-0.9
2,996,033	-		ABZR87_RS14180	0.80	-1.6
2,996,033	-		ABZR87_RS14180	0.80	-0.1
2,996,083	+		ABZR87_RS14180	0.90	-1.1
2,996,083	+		ABZR87_RS14180	0.90	-1.3
2,996,084	-		ABZR87_RS14180	0.90	+0.1