Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS10350

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
2,194,468	+		ABZR87_RS10345	0.36	+0.4
2,194,469	-		ABZR87_RS10345	0.36	+1.4
2,194,469	-		ABZR87_RS10345	0.36	+1.7
2,194,469	-		ABZR87_RS10345	0.36	+0.6
2,194,469	-		ABZR87_RS10345	0.36	-0.9
2,194,469	-		ABZR87_RS10345	0.36	-1.5
2,194,469	-		ABZR87_RS10345	0.36	-0.1
2,194,469	-		ABZR87_RS10345	0.36	-1.0
2,194,683	+		ABZR87_RS10345	0.51	-0.1
2,194,683	+		ABZR87_RS10345	0.51	+0.3
2,194,684	-		ABZR87_RS10345	0.51	-1.0
2,194,716	-		ABZR87_RS10345	0.53	+2.0
2,194,716	-		ABZR87_RS10345	0.53	+0.7
2,194,716	-		ABZR87_RS10345	0.53	+1.3
2,194,716	-		ABZR87_RS10345	0.53	-0.0
2,194,723	+		ABZR87_RS10345	0.54	-0.7
2,194,723	+		ABZR87_RS10345	0.54	+1.2
2,194,723	+		ABZR87_RS10345	0.54	+0.9
2,194,723	+		ABZR87_RS10345	0.54	+0.7
2,194,723	+		ABZR87_RS10345	0.54	+0.0
2,194,724	-		ABZR87_RS10345	0.54	-1.0
2,194,724	-		ABZR87_RS10345	0.54	+0.1
2,194,818	+		ABZR87_RS10345	0.61	+0.4
2,194,818	+		ABZR87_RS10345	0.61	-1.6
2,194,819	-		ABZR87_RS10345	0.61	+0.3
2,194,918	-		ABZR87_RS10345	0.68	-0.5
2,194,919	+		ABZR87_RS10345	0.68	+0.2
2,194,920	-		ABZR87_RS10345	0.68	-0.9
2,195,310	-				-0.4
2,195,392	+				-1.0
2,195,501	-		ABZR87_RS10350	0.20	-0.6
2,195,564	-		ABZR87_RS10350	0.29	+0.8
2,195,564	-		ABZR87_RS10350	0.29	-0.6
2,195,830	-		ABZR87_RS10350	0.69	-1.2
2,196,195	+				+0.2
2,196,226	-				-0.6
2,196,417	+		ABZR87_RS10355	0.22	-0.2
2,196,417	+		ABZR87_RS10355	0.22	-1.1
2,196,418	-		ABZR87_RS10355	0.22	+0.0
2,196,483	+		ABZR87_RS10355	0.27	+0.7
2,196,483	+		ABZR87_RS10355	0.27	-0.8
2,196,483	+		ABZR87_RS10355	0.27	+0.2
2,196,483	+		ABZR87_RS10355	0.27	-1.5
2,196,484	-		ABZR87_RS10355	0.27	+1.2
2,196,484	-		ABZR87_RS10355	0.27	+0.6
2,196,484	-		ABZR87_RS10355	0.27	-0.3
2,196,484	-		ABZR87_RS10355	0.27	-0.7
2,196,484	-		ABZR87_RS10355	0.27	-0.9
2,196,484	-		ABZR87_RS10355	0.27	+0.7
2,196,489	+		ABZR87_RS10355	0.27	-1.4
2,196,489	+		ABZR87_RS10355	0.27	-0.3
2,196,489	+		ABZR87_RS10355	0.27	+0.4
2,196,489	+		ABZR87_RS10355	0.27	-0.7
2,196,489	+		ABZR87_RS10355	0.27	+1.0
2,196,490	-		ABZR87_RS10355	0.27	-0.6
2,196,490	-		ABZR87_RS10355	0.27	-1.0
2,196,490	-		ABZR87_RS10355	0.27	+0.5
2,196,490	-		ABZR87_RS10355	0.27	-0.6
2,196,490	-		ABZR87_RS10355	0.27	-0.2
2,196,490	-		ABZR87_RS10355	0.27	+0.2
2,196,490	-		ABZR87_RS10355	0.27	-0.0
2,196,821	+		ABZR87_RS10355	0.52	-0.0
2,196,821	+		ABZR87_RS10355	0.52	-1.5
2,196,822	-		ABZR87_RS10355	0.52	+0.0