Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS10120

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
2,149,276	+		ABZR87_RS10110	0.80	-0.4
2,149,314	-		ABZR87_RS10110	0.85	-0.4
2,149,314	-		ABZR87_RS10110	0.85	-0.9
2,149,390	+				-1.0
2,149,390	+				-1.4
2,149,390	+				-0.4
2,149,390	+				+0.1
2,149,390	+				-0.2
2,149,391	-				-0.4
2,149,391	-				+0.7
2,149,391	-				-0.2
2,149,395	+				-0.1
2,149,395	+				+0.3
2,149,396	-				-1.0
2,149,409	+				-0.7
2,149,409	+				-0.1
2,149,409	+				+0.2
2,149,410	-				-0.5
2,149,410	-				-0.3
2,149,416	+				-0.4
2,149,416	+				+1.3
2,149,417	-				-0.1
2,150,025	-				-2.1
2,150,026	-				-1.7
2,150,026	-				-1.4
2,150,088	+				-1.9
2,150,088	+				-0.2
2,150,089	-				+2.5
2,150,204	+				+0.6
2,150,204	+				+0.0
2,150,204	+				-0.5
2,150,205	-				-0.7
2,150,344	+		ABZR87_RS10120	0.24	-0.1
2,150,481	-		ABZR87_RS10120	0.49	-1.3
2,150,481	-		ABZR87_RS10120	0.49	-1.9
2,150,764	+				-0.6
2,150,764	+				-0.9
2,150,785	+				-0.6
2,150,785	+				+0.2
2,151,171	+				-2.2
2,151,171	+				+0.7
2,151,184	-				-1.9
2,151,184	-				+0.1