Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS09305

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
1,970,292	+		ABZR87_RS09300	0.33	-3.6
1,970,293	-		ABZR87_RS09300	0.33	+0.0
1,970,323	-		ABZR87_RS09300	0.36	+0.2
1,970,323	-		ABZR87_RS09300	0.36	-0.1
1,970,511	+		ABZR87_RS09300	0.53	-0.2
1,970,511	+		ABZR87_RS09300	0.53	-1.1
1,970,511	+		ABZR87_RS09300	0.53	-0.5
1,970,512	-		ABZR87_RS09300	0.53	-0.3
1,970,623	-		ABZR87_RS09300	0.63	+0.1
1,970,623	-		ABZR87_RS09300	0.63	+1.6
1,970,623	-		ABZR87_RS09300	0.63	+0.7
1,970,688	+		ABZR87_RS09300	0.69	+0.3
1,970,688	+		ABZR87_RS09300	0.69	+0.3
1,970,688	+		ABZR87_RS09300	0.69	+0.4
1,970,689	-		ABZR87_RS09300	0.69	-0.1
1,970,689	-		ABZR87_RS09300	0.69	-0.9
1,970,760	+		ABZR87_RS09300	0.75	+1.2
1,970,760	+		ABZR87_RS09300	0.75	-0.3
1,970,760	+		ABZR87_RS09300	0.75	+1.7
1,970,760	+		ABZR87_RS09300	0.75	-0.7
1,970,760	+		ABZR87_RS09300	0.75	-1.1
1,970,761	-		ABZR87_RS09300	0.75	+0.2
1,970,761	-		ABZR87_RS09300	0.75	-0.4
1,970,761	-		ABZR87_RS09300	0.75	+0.1
1,970,884	-		ABZR87_RS09300	0.86	-0.8
1,970,901	+		ABZR87_RS09300	0.88	+0.3
1,970,902	-		ABZR87_RS09300	0.88	+0.4
1,970,902	-		ABZR87_RS09300	0.88	-0.6
1,970,958	+				+2.5
1,970,959	-				+0.3
1,971,073	+				-2.1
1,971,074	-				+0.4
1,971,074	-				-0.4
1,971,187	+		ABZR87_RS09305	0.15	+0.6
1,971,188	-		ABZR87_RS09305	0.15	+1.0
1,971,198	-		ABZR87_RS09305	0.16	+0.7
1,971,218	+		ABZR87_RS09305	0.18	+0.3
1,971,218	+		ABZR87_RS09305	0.18	-0.0
1,971,218	+		ABZR87_RS09305	0.18	+0.4
1,971,218	+		ABZR87_RS09305	0.18	-0.5
1,971,218	+		ABZR87_RS09305	0.18	+0.1
1,971,219	-		ABZR87_RS09305	0.18	+0.1
1,971,219	-		ABZR87_RS09305	0.18	+0.5
1,971,219	-		ABZR87_RS09305	0.18	-0.1
1,971,219	-		ABZR87_RS09305	0.18	-0.2
1,971,219	-		ABZR87_RS09305	0.18	-1.6
1,971,219	-		ABZR87_RS09305	0.18	-0.2
1,971,220	+		ABZR87_RS09305	0.18	-1.5
1,971,220	+		ABZR87_RS09305	0.18	-0.4
1,971,221	-		ABZR87_RS09305	0.18	-0.3
1,971,263	+		ABZR87_RS09305	0.22	-0.2
1,971,263	+		ABZR87_RS09305	0.22	-0.4
1,971,264	-		ABZR87_RS09305	0.22	-0.2
1,971,264	-		ABZR87_RS09305	0.22	-0.5
1,971,264	-		ABZR87_RS09305	0.22	-0.4
1,971,264	-		ABZR87_RS09305	0.22	+0.9
1,971,299	+		ABZR87_RS09305	0.25	+0.4
1,971,299	+		ABZR87_RS09305	0.25	-0.5
1,971,300	-		ABZR87_RS09305	0.26	-1.4
1,971,300	-		ABZR87_RS09305	0.26	+0.2
1,971,365	+		ABZR87_RS09305	0.32	+0.6
1,971,365	+		ABZR87_RS09305	0.32	-0.7
1,971,365	+		ABZR87_RS09305	0.32	-0.5
1,971,365	+		ABZR87_RS09305	0.32	-0.3
1,971,365	+		ABZR87_RS09305	0.32	-0.7
1,971,365	+		ABZR87_RS09305	0.32	-0.0
1,971,365	+		ABZR87_RS09305	0.32	+0.7
1,971,365	+		ABZR87_RS09305	0.32	+0.1
1,971,501	-		ABZR87_RS09305	0.45	-0.7
1,971,506	+		ABZR87_RS09305	0.45	+1.1
1,971,507	-		ABZR87_RS09305	0.45	-1.2
1,971,555	-		ABZR87_RS09305	0.50	+1.2
1,971,602	+		ABZR87_RS09305	0.54	-0.6
1,971,602	+		ABZR87_RS09305	0.54	-0.1
1,971,603	-		ABZR87_RS09305	0.54	-0.9
1,971,603	-		ABZR87_RS09305	0.54	-0.4
1,971,665	+		ABZR87_RS09305	0.60	-0.9
1,971,665	+		ABZR87_RS09305	0.60	+0.1
1,971,665	+		ABZR87_RS09305	0.60	+1.2
1,971,665	+		ABZR87_RS09305	0.60	-0.2
1,971,666	-		ABZR87_RS09305	0.60	-0.1
1,971,671	+		ABZR87_RS09305	0.61	-1.8
1,971,803	+		ABZR87_RS09305	0.73	-1.6
1,971,803	+		ABZR87_RS09305	0.73	-3.1
1,971,804	-		ABZR87_RS09305	0.74	-0.2
1,971,804	-		ABZR87_RS09305	0.74	+0.2
1,971,927	-		ABZR87_RS09305	0.85	+0.3
1,971,927	-		ABZR87_RS09305	0.85	-0.0
1,971,962	+		ABZR87_RS09305	0.89	-0.7
1,971,963	-		ABZR87_RS09305	0.89	-0.7
1,972,080	-				+0.1
1,972,080	-				-0.4
1,972,486	-				+1.6
1,972,486	-				+0.4
1,972,608	+		ABZR87_RS09310	0.14	+0.2
1,972,792	+		ABZR87_RS09310	0.23	-0.1
1,972,793	-		ABZR87_RS09310	0.23	-0.5
1,972,793	-		ABZR87_RS09310	0.23	-0.0
1,972,793	-		ABZR87_RS09310	0.23	-1.5
1,972,795	+		ABZR87_RS09310	0.23	-0.0
1,972,795	+		ABZR87_RS09310	0.23	-0.2
1,972,796	-		ABZR87_RS09310	0.23	-0.8
1,972,796	-		ABZR87_RS09310	0.23	-0.6
1,972,796	-		ABZR87_RS09310	0.23	-2.3
1,972,801	+		ABZR87_RS09310	0.23	-1.1
1,972,802	-		ABZR87_RS09310	0.23	-0.0
1,972,946	-		ABZR87_RS09310	0.30	-0.7
1,972,990	-		ABZR87_RS09310	0.32	-0.4
1,973,080	+		ABZR87_RS09310	0.36	+0.0