Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS08455

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
1,795,867	+				-0.6
1,795,867	+				+0.8
1,795,867	+				+0.9
1,795,867	+				+0.0
1,795,867	+				-0.8
1,795,867	+				-2.8
1,795,868	-				+0.7
1,795,868	-				-0.4
1,795,971	+				+0.1
1,795,971	+				-0.5
1,795,972	-				-0.7
1,796,122	+				+0.5
1,796,122	+				+0.8
1,796,123	-				+0.7
1,796,123	-				+0.5
1,796,123	-				-0.2
1,796,123	-				-1.5
1,796,123	-				-0.3
1,796,123	-				-0.6
1,796,286	+		ABZR87_RS08455	0.15	-0.5
1,796,286	+		ABZR87_RS08455	0.15	-0.5
1,796,286	+		ABZR87_RS08455	0.15	-0.7
1,796,287	-		ABZR87_RS08455	0.15	-0.3
1,796,287	-		ABZR87_RS08455	0.15	+0.3
1,796,319	+		ABZR87_RS08455	0.18	-0.2
1,796,320	-		ABZR87_RS08455	0.18	-0.2
1,796,320	-		ABZR87_RS08455	0.18	-0.7
1,796,320	-		ABZR87_RS08455	0.18	-0.4
1,796,362	-		ABZR87_RS08455	0.22	+0.2
1,796,362	-		ABZR87_RS08455	0.22	-0.3
1,796,506	+		ABZR87_RS08455	0.35	-0.1
1,796,506	+		ABZR87_RS08455	0.35	-0.0
1,796,507	-		ABZR87_RS08455	0.35	-0.4
1,796,586	+		ABZR87_RS08455	0.42	-0.8
1,796,586	+		ABZR87_RS08455	0.42	+0.3
1,796,586	+		ABZR87_RS08455	0.42	-0.3
1,796,586	+		ABZR87_RS08455	0.42	+0.6
1,796,586	+		ABZR87_RS08455	0.42	+0.3
1,796,587	-		ABZR87_RS08455	0.42	-1.0
1,796,632	-		ABZR87_RS08455	0.47	+0.4
1,796,632	-		ABZR87_RS08455	0.47	-0.1
1,796,735	+		ABZR87_RS08455	0.56	+0.3
1,796,736	+		ABZR87_RS08455	0.56	-1.5
1,796,736	+		ABZR87_RS08455	0.56	-0.4
1,796,737	-		ABZR87_RS08455	0.56	+0.0
1,796,737	-		ABZR87_RS08455	0.56	-1.0
1,796,737	-		ABZR87_RS08455	0.56	+0.4
1,796,737	-		ABZR87_RS08455	0.56	-1.1
1,796,737	-		ABZR87_RS08455	0.56	-1.7
1,796,745	+		ABZR87_RS08455	0.57	+0.5
1,796,745	+		ABZR87_RS08455	0.57	-0.7
1,796,745	+		ABZR87_RS08455	0.57	-1.3
1,796,746	-		ABZR87_RS08455	0.57	+0.2
1,796,771	-		ABZR87_RS08455	0.59	+0.5
1,796,771	-		ABZR87_RS08455	0.59	-0.1
1,796,880	+		ABZR87_RS08455	0.70	-0.3
1,796,880	+		ABZR87_RS08455	0.70	+0.3
1,796,880	+		ABZR87_RS08455	0.70	+0.0
1,796,880	+		ABZR87_RS08455	0.70	+2.3
1,796,880	+		ABZR87_RS08455	0.70	+0.1
1,796,881	-		ABZR87_RS08455	0.70	-0.0
1,796,881	-		ABZR87_RS08455	0.70	-0.1
1,796,881	-		ABZR87_RS08455	0.70	-0.9
1,796,881	-		ABZR87_RS08455	0.70	-0.4
1,796,881	-		ABZR87_RS08455	0.70	+0.0
1,796,881	-		ABZR87_RS08455	0.70	-0.8
1,796,907	+		ABZR87_RS08455	0.72	+0.3
1,796,908	-		ABZR87_RS08455	0.72	+0.8
1,797,081	+		ABZR87_RS08455	0.88	+0.5
1,797,082	-		ABZR87_RS08455	0.88	-0.1
1,797,082	-		ABZR87_RS08455	0.88	-0.8
1,797,082	-		ABZR87_RS08455	0.88	-1.7
1,797,186	+				+1.1
1,797,208	-				-0.7
1,797,266	+				-1.1
1,797,362	+		ABZR87_RS08460	0.12	+0.3
1,797,363	-		ABZR87_RS08460	0.12	+0.8
1,797,586	-		ABZR87_RS08460	0.32	-0.6
1,797,620	+		ABZR87_RS08460	0.35	+0.1
1,797,620	+		ABZR87_RS08460	0.35	+0.6
1,797,620	+		ABZR87_RS08460	0.35	+0.2
1,797,620	+		ABZR87_RS08460	0.35	+0.5
1,797,621	-		ABZR87_RS08460	0.35	-0.0
1,797,777	+		ABZR87_RS08460	0.50	-1.3
1,797,778	-		ABZR87_RS08460	0.50	+1.5
1,797,778	-		ABZR87_RS08460	0.50	+0.0
1,797,778	-		ABZR87_RS08460	0.50	-0.8
1,797,927	+		ABZR87_RS08460	0.64	+0.3
1,797,928	-		ABZR87_RS08460	0.64	+0.1
1,798,059	+		ABZR87_RS08460	0.76	-1.0
1,798,060	-		ABZR87_RS08460	0.76	-0.5
1,798,060	-		ABZR87_RS08460	0.76	-0.5
1,798,060	-		ABZR87_RS08460	0.76	+0.4
1,798,081	-		ABZR87_RS08460	0.78	+0.9