Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS08170

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
1,737,809	+		ABZR87_RS08165	0.45	-0.3
1,737,810	-		ABZR87_RS08165	0.46	+0.9
1,738,416	+				+0.1
1,738,417	-				+0.9
1,738,417	-				+0.1
1,738,608	+				-0.0
1,738,609	-				-0.6
1,738,712	-		ABZR87_RS08170	0.20	+2.9
1,738,800	+		ABZR87_RS08170	0.33	+0.5
1,738,935	+		ABZR87_RS08170	0.53	+0.3
1,738,935	+		ABZR87_RS08170	0.53	+0.5
1,738,935	+		ABZR87_RS08170	0.53	+1.3
1,739,001	+		ABZR87_RS08170	0.63	-0.7
1,739,002	-		ABZR87_RS08170	0.63	+2.9
1,739,088	+		ABZR87_RS08170	0.75	+0.4
1,739,088	+		ABZR87_RS08170	0.75	-0.1
1,739,088	+		ABZR87_RS08170	0.75	-0.5
1,739,088	+		ABZR87_RS08170	0.75	-0.0
1,739,088	+		ABZR87_RS08170	0.75	-0.4
1,739,089	-		ABZR87_RS08170	0.76	-1.5
1,739,089	-		ABZR87_RS08170	0.76	+0.4
1,739,089	-		ABZR87_RS08170	0.76	-1.5
1,739,415	+		ABZR87_RS08175	0.16	+0.2
1,739,415	+		ABZR87_RS08175	0.16	-0.1
1,739,415	+		ABZR87_RS08175	0.16	+0.8
1,739,904	+		ABZR87_RS08175	0.84	-1.1
1,739,904	+		ABZR87_RS08175	0.84	+1.9
1,739,904	+		ABZR87_RS08175	0.84	+0.5
1,740,112	+				-2.7
1,740,112	+				-0.2
1,740,113	-				-1.2
1,740,116	+				+0.3
1,740,116	+				-0.7
1,740,116	+				-0.1
1,740,117	-				-0.2
1,740,117	-				+1.3
1,740,117	-				+1.9
1,740,117	-				+0.6
1,740,117	-				-0.4
1,740,128	+				+2.7
1,740,128	+				+0.0
1,740,129	-				+0.2
1,740,129	-				+0.9
1,740,129	-				-0.7
1,740,129	-				+0.2
1,740,129	-				+0.6
1,740,129	-				+0.1
1,740,129	-				+0.6