Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS06220

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
1,326,719	+		ABZR87_RS06215	0.17	-0.7
1,326,725	+		ABZR87_RS06215	0.17	-1.2
1,326,726	-		ABZR87_RS06215	0.17	+0.1
1,326,968	+		ABZR87_RS06215	0.38	+0.6
1,326,969	-		ABZR87_RS06215	0.38	+0.9
1,327,163	+		ABZR87_RS06215	0.55	+1.3
1,327,164	-		ABZR87_RS06215	0.55	+0.5
1,327,164	-		ABZR87_RS06215	0.55	-0.4
1,327,424	+		ABZR87_RS06215	0.77	-0.4
1,327,425	-		ABZR87_RS06215	0.78	-0.8
1,327,442	+		ABZR87_RS06215	0.79	-1.4
1,327,442	+		ABZR87_RS06215	0.79	-0.1
1,327,442	+		ABZR87_RS06215	0.79	-1.0
1,327,443	-		ABZR87_RS06215	0.79	-0.6
1,327,443	-		ABZR87_RS06215	0.79	+0.8
1,327,443	-		ABZR87_RS06215	0.79	-0.7
1,327,443	-		ABZR87_RS06215	0.79	-0.2
1,327,443	-		ABZR87_RS06215	0.79	-0.3
1,327,580	+				-0.0
1,327,652	+				+0.7
1,327,653	-				+0.3
1,327,653	-				+0.6
1,327,653	-				-0.1
1,327,883	+				+0.1
1,327,884	-				-0.6
1,327,884	-				-1.3
1,327,950	-		ABZR87_RS06220	0.13	-1.0
1,328,105	+		ABZR87_RS06220	0.21	-0.6
1,328,106	-		ABZR87_RS06220	0.21	+0.2
1,328,508	-		ABZR87_RS06220	0.41	-1.2
1,328,508	-		ABZR87_RS06220	0.41	-0.4
1,328,508	-		ABZR87_RS06220	0.41	+1.5
1,328,558	+		ABZR87_RS06220	0.44	+0.6
1,328,559	-		ABZR87_RS06220	0.44	+0.1
1,328,852	+		ABZR87_RS06220	0.58	+0.7
1,328,855	+		ABZR87_RS06220	0.58	-1.3
1,328,855	+		ABZR87_RS06220	0.58	-0.1
1,329,182	+		ABZR87_RS06220	0.75	+1.0
1,329,420	+		ABZR87_RS06220	0.87	+0.4
1,329,421	+		ABZR87_RS06220	0.87	-0.7
1,329,428	+		ABZR87_RS06220	0.87	-0.2
1,329,429	-		ABZR87_RS06220	0.87	+0.6
1,329,429	-		ABZR87_RS06220	0.87	-0.4
1,329,429	-		ABZR87_RS06220	0.87	-0.2
1,329,429	-		ABZR87_RS06220	0.87	-0.0
1,329,429	-		ABZR87_RS06220	0.87	+0.3
1,329,825	+				-0.1
1,329,826	-				+0.5
1,329,826	-				-0.2
1,329,926	-		ABZR87_RS06225	0.10	+2.7
1,330,016	-		ABZR87_RS06225	0.16	+0.5
1,330,084	+		ABZR87_RS06225	0.20	+0.2
1,330,085	-		ABZR87_RS06225	0.20	-1.2
1,330,085	-		ABZR87_RS06225	0.20	+0.8
1,330,085	-		ABZR87_RS06225	0.20	-0.3
1,330,136	-		ABZR87_RS06225	0.24	-0.3
1,330,251	+		ABZR87_RS06225	0.31	-0.5
1,330,301	-		ABZR87_RS06225	0.34	-0.1
1,330,301	-		ABZR87_RS06225	0.34	-0.7
1,330,301	-		ABZR87_RS06225	0.34	+0.1
1,330,301	-		ABZR87_RS06225	0.34	-1.4
1,330,301	-		ABZR87_RS06225	0.34	+0.7
1,330,577	-		ABZR87_RS06225	0.51	-0.4
1,330,577	-		ABZR87_RS06225	0.51	+0.3