Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05130

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
1,080,304	+				+0.1
1,080,305	-				-0.5
1,080,305	-				+0.5
1,080,355	+				-0.2
1,080,356	-				-0.2
1,080,356	-				+1.0
1,080,372	+				-0.2
1,080,372	+				-1.5
1,080,373	-				+0.8
1,080,373	-				+0.4
1,080,373	-				+0.6
1,080,373	-				-0.1
1,080,388	+				-0.7
1,080,388	+				-0.1
1,080,389	-				-0.3
1,080,389	-				-0.8
1,080,495	-				-0.6
1,080,580	+				-0.4
1,080,580	+				+0.9
1,080,580	+				-0.4
1,080,580	+				-0.4
1,080,581	-				-0.7
1,080,581	-				-0.9
1,080,581	-				-0.1
1,080,716	+		ABZR87_RS05125	0.22	+0.4
1,080,716	+		ABZR87_RS05125	0.22	+0.4
1,080,716	+		ABZR87_RS05125	0.22	-0.9
1,080,716	+		ABZR87_RS05125	0.22	-0.3
1,080,717	-		ABZR87_RS05125	0.22	+1.1
1,080,749	+		ABZR87_RS05125	0.27	-0.7
1,080,749	+		ABZR87_RS05125	0.27	+0.1
1,080,749	+		ABZR87_RS05125	0.27	+0.7
1,080,750	-		ABZR87_RS05125	0.27	+0.2
1,080,750	-		ABZR87_RS05125	0.27	-0.4
1,080,750	-		ABZR87_RS05125	0.27	+0.1
1,080,750	-		ABZR87_RS05125	0.27	+0.1
1,080,827	+		ABZR87_RS05125	0.40	-0.4
1,080,827	+		ABZR87_RS05125	0.40	-0.5
1,080,827	+		ABZR87_RS05125	0.40	-0.4
1,080,827	+		ABZR87_RS05125	0.40	-0.6
1,080,828	-		ABZR87_RS05125	0.40	+0.9
1,080,828	-		ABZR87_RS05125	0.40	-1.0
1,080,917	+		ABZR87_RS05125	0.55	+0.1
1,080,917	+		ABZR87_RS05125	0.55	+0.3
1,080,918	-		ABZR87_RS05125	0.55	+0.0
1,080,918	-		ABZR87_RS05125	0.55	-0.2
1,080,996	-		ABZR87_RS05125	0.67	-0.0
1,080,996	-		ABZR87_RS05125	0.67	+0.1
1,081,106	+		ABZR87_RS05125	0.85	-1.8
1,081,106	+		ABZR87_RS05125	0.85	-0.7
1,081,106	+		ABZR87_RS05125	0.85	-0.2
1,081,107	-		ABZR87_RS05125	0.86	-0.0
1,081,107	-		ABZR87_RS05125	0.86	-0.4
1,081,107	-		ABZR87_RS05125	0.86	-0.0
1,081,107	-		ABZR87_RS05125	0.86	-0.7
1,081,107	-		ABZR87_RS05125	0.86	-1.0
1,081,193	+				+0.2
1,081,193	+				-0.4
1,081,193	+				-0.2
1,081,193	+				+0.4
1,081,193	+				+1.0
1,081,193	+				+0.9
1,081,194	-				+1.0
1,081,194	-				+0.2
1,081,292	+				-1.7
1,081,292	+				+0.9
1,081,292	+				-0.3
1,081,292	+				+0.1
1,081,292	+				-0.1
1,081,292	+				-0.4
1,081,292	+				-1.4
1,081,292	+				-0.8
1,081,292	+				-0.7
1,081,292	+				-0.0
1,081,293	-				+0.2
1,081,293	-				-1.7
1,081,293	-				-0.7
1,081,438	-		ABZR87_RS05130	0.71	-1.3
1,081,510	+				+0.6
1,081,510	+				+0.2
1,081,510	+				-0.6
1,081,511	-				+0.8
1,081,511	-				-0.5
1,081,511	-				-0.3
1,081,511	-				+0.9
1,081,531	+				+0.1
1,081,531	+				-0.2
1,081,532	-				+0.6
1,081,532	-				+1.6
1,081,532	-				-0.5
1,081,532	-				+0.2
1,081,532	-				+0.1
1,081,532	-				+2.6
1,081,809	-		ABZR87_RS05135	0.48	-0.4
1,082,126	+				-0.4
1,082,157	+				+0.1
1,082,157	+				-0.2
1,082,158	-				-0.0
1,082,158	-				+0.6
1,082,158	-				-0.1
1,082,310	+		ABZR87_RS05140	0.11	-0.4
1,082,483	+		ABZR87_RS05140	0.24	-0.4