Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS00390

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
78,325	+				+0.6
78,326	+				-1.2
78,326	+				+0.3
78,326	+				-0.2
78,326	+				+1.1
78,326	+				-1.5
78,326	+				-0.5
78,326	+				+0.5
78,326	+				+0.5
78,326	+				-0.2
78,326	+				+1.2
78,326	+				-0.8
78,326	+				+0.6
78,326	+				+2.4
78,327	-				-2.8
78,327	-				-0.0
78,327	-				-0.1
78,327	-				-1.1
78,327	-				-0.7
78,327	-				-0.6
78,327	-				-0.8
78,425	-				-1.2
78,453	+				-1.0
78,454	-				-0.7
78,454	-				-0.3
78,454	-				-0.6
78,497	+				+0.6
78,497	+				+0.4
78,497	+				+0.4
78,498	-				-1.2
78,498	-				-0.3
78,498	-				+0.8
78,532	+				+0.6
78,533	-				+0.0
78,533	-				-0.7
78,533	-				-0.6
78,533	-				+0.3
78,554	+				-0.3
78,555	-				-0.6
78,941	+		ABZR87_RS00385	0.61	-1.2
78,942	-		ABZR87_RS00385	0.61	-1.4
79,267	+				-1.2
79,267	+				-0.8
79,273	+				+2.4
79,274	-				-0.1
79,366	+				-1.7
79,366	+				+0.2
79,367	-				-1.4
79,464	+		ABZR87_RS00390	0.11	-0.6
79,464	+		ABZR87_RS00390	0.11	-0.9
79,464	+		ABZR87_RS00390	0.11	-1.3
79,464	+		ABZR87_RS00390	0.11	-1.6
79,464	+		ABZR87_RS00390	0.11	-2.1
79,464	+		ABZR87_RS00390	0.11	+1.3
79,464	+		ABZR87_RS00390	0.11	+0.6
79,464	+		ABZR87_RS00390	0.11	-0.5
79,465	-		ABZR87_RS00390	0.11	-2.1
79,465	-		ABZR87_RS00390	0.11	-0.5
79,674	+		ABZR87_RS00390	0.22	-1.7
79,674	+		ABZR87_RS00390	0.22	-1.8
79,675	-		ABZR87_RS00390	0.22	+1.5
79,675	-		ABZR87_RS00390	0.22	-0.4
79,675	-		ABZR87_RS00390	0.22	+0.7
79,675	-		ABZR87_RS00390	0.22	+0.2
79,675	-		ABZR87_RS00390	0.22	+0.5
79,675	-		ABZR87_RS00390	0.22	-1.0
79,829	-		ABZR87_RS00390	0.31	-0.2
79,829	-		ABZR87_RS00390	0.31	-0.5
79,829	-		ABZR87_RS00390	0.31	-0.8
79,888	+		ABZR87_RS00390	0.34	-0.7
79,888	+		ABZR87_RS00390	0.34	-1.1
79,889	-		ABZR87_RS00390	0.34	+0.0
79,889	-		ABZR87_RS00390	0.34	-0.3
79,889	-		ABZR87_RS00390	0.34	-0.4
79,891	+		ABZR87_RS00390	0.34	-0.4
79,891	+		ABZR87_RS00390	0.34	-0.8
79,891	+		ABZR87_RS00390	0.34	+0.1
79,891	+		ABZR87_RS00390	0.34	-1.3
79,891	+		ABZR87_RS00390	0.34	+0.0
79,891	+		ABZR87_RS00390	0.34	-1.1
79,892	-		ABZR87_RS00390	0.34	-0.6
79,892	-		ABZR87_RS00390	0.34	-0.5
79,892	-		ABZR87_RS00390	0.34	-1.2
80,080	-		ABZR87_RS00390	0.44	-2.1
80,323	-		ABZR87_RS00390	0.58	-0.5
80,560	+		ABZR87_RS00390	0.70	-1.6
80,560	+		ABZR87_RS00390	0.70	-1.6
80,561	-		ABZR87_RS00390	0.70	-0.6
80,737	+		ABZR87_RS00390	0.80	-1.2
80,737	+		ABZR87_RS00390	0.80	-0.7
80,737	+		ABZR87_RS00390	0.80	-1.3
80,737	+		ABZR87_RS00390	0.80	-0.9
80,737	+		ABZR87_RS00390	0.80	-0.5
80,738	-		ABZR87_RS00390	0.80	-0.3
80,738	-		ABZR87_RS00390	0.80	-0.6
80,738	-		ABZR87_RS00390	0.80	+0.1
80,738	-		ABZR87_RS00390	0.80	-2.3
80,860	+		ABZR87_RS00390	0.87	-1.5
80,861	-		ABZR87_RS00390	0.87	-0.6
81,230	+				-0.6
81,231	-				+0.5
81,231	-				-0.8
81,232	+				+0.0
81,232	+				-0.1
81,232	+				-2.3
81,232	+				-0.2
81,232	+				-0.4
81,232	+				-0.4
81,232	+				+0.0
81,232	+				+0.2
81,232	+				-1.0
81,232	+				-1.0
81,233	-				+0.4
81,233	-				+0.2
81,233	-				-1.1
81,233	-				-1.0
81,233	-				-0.2
81,233	-				+0.5
81,233	-				-0.2
81,233	-				-0.2
81,234	+				-1.6
81,234	+				+1.0
81,234	+				-1.2
81,234	+				+0.5
81,234	+				-0.4
81,234	+				+0.6
81,234	+				+0.2
81,234	+				-0.4
81,280	+				-0.5