Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2096
Experiment: MoLS4 with Pantothenic with Casamino acids (vit. assay) 0.05%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoLS4 with Pantothenic with Casamino acids (vit. assay) 0.05% |
|---|---|---|---|---|---|
| remove | |||||
| 2,183,983 | + | thiG | DVU2094 | 0.67 | -2.2 |
| 2,184,212 | + | -1.8 | |||
| 2,184,252 | - | -1.6 | |||
| 2,184,282 | + | thiS | DVU2095 | 0.17 | -1.9 |
| 2,184,290 | - | thiS | DVU2095 | 0.21 | -1.3 |
| 2,184,290 | - | thiS | DVU2095 | 0.21 | -1.9 |
| 2,184,336 | + | thiS | DVU2095 | 0.44 | -0.2 |
| 2,184,380 | + | thiS | DVU2095 | 0.66 | -1.7 |
| 2,184,397 | + | thiS | DVU2095 | 0.74 | -2.0 |
| 2,184,405 | - | thiS | DVU2095 | 0.78 | -1.9 |
| 2,184,512 | - | -0.1 | |||
| 2,184,543 | - | +0.4 | |||
| 2,184,566 | + | -1.6 | |||
| 2,184,594 | - | -1.3 | |||
| 2,184,667 | + | -0.5 | |||
| 2,184,673 | + | +1.5 | |||
| 2,184,830 | - | -1.0 | |||
| 2,184,847 | - | +0.1 | |||
| 2,184,930 | - | +0.0 | |||
| 2,185,019 | + | DVU2096 | 0.48 | -0.6 | |
| 2,185,075 | - | +0.7 | |||
| 2,185,182 | - | -2.8 | |||
| 2,185,190 | - | -0.6 | |||
| 2,185,302 | + | +0.3 | |||
| 2,185,332 | - | -1.0 | |||
| 2,185,333 | - | -0.3 | |||
| 2,185,342 | - | -0.4 | |||
| 2,185,749 | - | DVU2097 | 0.61 | -0.1 | |
| 2,185,774 | - | DVU2097 | 0.65 | +0.5 | |
| 2,185,898 | + | DVU2097 | 0.84 | -0.0 | |
| 2,186,023 | + | -0.2 | |||
| 2,186,049 | + | -0.0 | |||
| 2,186,049 | + | -1.1 |
Or see this region's nucleotide sequence