Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS22920

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
1,500,858	-		ABZR87_RS22915	0.64	-0.4
1,500,967	+		ABZR87_RS22915	0.71	-0.4
1,500,967	+		ABZR87_RS22915	0.71	+1.1
1,500,968	-		ABZR87_RS22915	0.71	-1.6
1,500,968	-		ABZR87_RS22915	0.71	-0.5
1,500,968	-		ABZR87_RS22915	0.71	+0.5
1,500,968	-		ABZR87_RS22915	0.71	-0.9
1,500,978	+		ABZR87_RS22915	0.72	+0.1
1,500,978	+		ABZR87_RS22915	0.72	+0.1
1,500,979	-		ABZR87_RS22915	0.72	+0.3
1,500,979	-		ABZR87_RS22915	0.72	-1.4
1,501,043	+		ABZR87_RS22915	0.76	+0.6
1,501,043	+		ABZR87_RS22915	0.76	+0.0
1,501,044	-		ABZR87_RS22915	0.76	+0.2
1,501,044	-		ABZR87_RS22915	0.76	-0.7
1,501,130	+		ABZR87_RS22915	0.82	+1.0
1,501,130	+		ABZR87_RS22915	0.82	-0.4
1,501,130	+		ABZR87_RS22915	0.82	+1.0
1,501,131	-		ABZR87_RS22915	0.82	-0.1
1,501,187	+		ABZR87_RS22915	0.86	-1.6
1,501,233	-		ABZR87_RS22915	0.89	+0.0
1,501,233	-		ABZR87_RS22915	0.89	+1.1
1,501,233	-		ABZR87_RS22915	0.89	-0.2
1,501,233	-		ABZR87_RS22915	0.89	-0.4
1,501,421	+				+1.3
1,501,421	+				-0.2
1,501,421	+				-0.5
1,501,421	+				+0.4
1,501,421	+				+0.8
1,501,422	-				+0.8
1,501,426	+				-1.5
1,501,426	+				+0.1
1,501,427	-				+0.4
1,501,431	+				+1.4
1,501,432	-				+0.2
1,501,432	-				+0.5
1,501,432	-				-0.3
1,501,432	-				+0.3
1,501,440	-				-1.2
1,501,470	+				+0.1
1,501,470	+				-0.3
1,501,473	+				+0.5
1,501,473	+				+0.0
1,501,473	+				-0.8
1,501,474	-				-0.4
1,501,476	+				-2.3
1,501,477	-				-0.3
1,501,477	-				+0.6
1,501,477	-				+1.0
1,501,479	+				+1.0
1,501,479	+				+0.5
1,501,479	+				+1.4
1,501,479	+				+0.2
1,501,479	+				+0.2
1,501,480	-				+0.4
1,501,480	-				+1.0
1,501,620	+				-0.1
1,501,658	+				+0.0
1,501,667	+				+1.2
1,501,786	+				+0.0
1,501,787	-				+1.2
1,501,845	+				-0.8
1,501,846	-				+0.2
1,501,939	+		ABZR87_RS22920	0.12	-2.3
1,502,167	+		ABZR87_RS22920	0.25	-0.2
1,502,168	-		ABZR87_RS22920	0.25	-0.2
1,502,168	-		ABZR87_RS22920	0.25	-1.4
1,502,309	-		ABZR87_RS22920	0.33	+0.3
1,502,389	+		ABZR87_RS22920	0.37	+0.4
1,502,390	-		ABZR87_RS22920	0.37	-2.6
1,502,542	+		ABZR87_RS22920	0.45	-0.4
1,502,542	+		ABZR87_RS22920	0.45	-0.7
1,502,542	+		ABZR87_RS22920	0.45	-0.8
1,502,542	+		ABZR87_RS22920	0.45	-0.8
1,502,542	+		ABZR87_RS22920	0.45	-1.2
1,502,543	-		ABZR87_RS22920	0.45	-0.0
1,503,145	+		ABZR87_RS22920	0.78	-0.3
1,503,145	+		ABZR87_RS22920	0.78	-0.8
1,503,442	+				-0.9
1,503,442	+				-2.2
1,503,443	-				-0.7
1,503,541	+				+0.5
1,503,542	-				+1.6
1,503,542	-				-0.3
1,503,595	-				-1.4
1,503,595	-				+2.1
1,503,619	+				-2.4
1,503,817	+		ABZR87_RS22925	0.32	-0.3
1,503,818	-		ABZR87_RS22925	0.32	+0.2
1,503,818	-		ABZR87_RS22925	0.32	-0.0
1,503,837	+		ABZR87_RS22925	0.35	+0.3
1,503,837	+		ABZR87_RS22925	0.35	+0.0
1,503,837	+		ABZR87_RS22925	0.35	-0.2
1,503,838	-		ABZR87_RS22925	0.35	+0.1
1,503,838	-		ABZR87_RS22925	0.35	+0.3
1,504,179	+		ABZR87_RS22925	0.84	+0.9
1,504,179	+		ABZR87_RS22925	0.84	+0.2
1,504,179	+		ABZR87_RS22925	0.84	-0.7
1,504,180	-		ABZR87_RS22925	0.84	-0.2
1,504,180	-		ABZR87_RS22925	0.84	+0.4
1,504,180	-		ABZR87_RS22925	0.84	-0.8
1,504,180	-		ABZR87_RS22925	0.84	-1.3
1,504,249	+				-1.8
1,504,250	-				+0.1
1,504,283	+				-0.2
1,504,283	+				+0.2
1,504,285	+				-0.5
1,504,285	+				-0.9
1,504,285	+				-0.2
1,504,309	+				+0.0
1,504,310	-				+0.3
1,504,344	+				-0.8
1,504,345	-				+0.1
1,504,416	+				+0.3
1,504,417	-				-2.3