Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS22220

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
1,346,379	+		ABZR87_RS22210	0.16	+0.0
1,346,379	+		ABZR87_RS22210	0.16	-1.1
1,346,379	+		ABZR87_RS22210	0.16	-0.8
1,346,380	-		ABZR87_RS22210	0.17	-0.2
1,346,380	-		ABZR87_RS22210	0.17	-2.0
1,346,592	+		ABZR87_RS22210	0.45	-1.3
1,346,592	+		ABZR87_RS22210	0.45	-0.7
1,346,592	+		ABZR87_RS22210	0.45	-0.5
1,346,593	-		ABZR87_RS22210	0.45	+0.1
1,346,604	+		ABZR87_RS22210	0.46	-1.0
1,346,604	+		ABZR87_RS22210	0.46	-1.8
1,346,604	+		ABZR87_RS22210	0.46	-0.8
1,346,605	-		ABZR87_RS22210	0.47	+0.4
1,347,037	+				+0.4
1,347,038	-				+2.0
1,347,283	+				-0.2
1,347,283	+				-0.3
1,347,284	-				-1.1
1,347,284	-				+0.2
1,347,284	-				+0.4
1,347,373	+				-1.4
1,347,373	+				-0.0
1,347,373	+				-0.2
1,347,373	+				-0.7
1,347,373	+				-1.7
1,347,373	+				-0.5
1,347,374	-				-2.2
1,347,374	-				+0.7
1,347,453	+		ABZR87_RS22220	0.16	-0.4
1,347,453	+		ABZR87_RS22220	0.16	-2.2
1,347,453	+		ABZR87_RS22220	0.16	-0.5
1,347,453	+		ABZR87_RS22220	0.16	-2.4
1,347,454	-		ABZR87_RS22220	0.16	-0.7
1,347,532	+		ABZR87_RS22220	0.26	-1.4
1,347,532	+		ABZR87_RS22220	0.26	-0.5
1,347,532	+		ABZR87_RS22220	0.26	-0.9
1,347,532	+		ABZR87_RS22220	0.26	-2.4
1,347,532	+		ABZR87_RS22220	0.26	-0.4
1,347,532	+		ABZR87_RS22220	0.26	+0.1
1,347,533	-		ABZR87_RS22220	0.26	-2.5
1,347,533	-		ABZR87_RS22220	0.26	-0.6
1,347,533	-		ABZR87_RS22220	0.26	-0.0
1,347,533	-		ABZR87_RS22220	0.26	+0.2
1,348,172	+				+0.1
1,348,173	-				+0.5
1,348,265	+				+0.9
1,348,265	+				-0.8
1,348,451	+		ABZR87_RS22225	0.33	-0.8
1,348,451	+		ABZR87_RS22225	0.33	+0.3
1,348,452	-		ABZR87_RS22225	0.33	-0.7
1,348,553	+		ABZR87_RS22225	0.47	-0.5
1,348,554	+		ABZR87_RS22225	0.47	-0.5
1,348,664	+		ABZR87_RS22225	0.63	-1.4
1,348,664	+		ABZR87_RS22225	0.63	+0.4
1,348,665	-		ABZR87_RS22225	0.63	+0.0
1,348,665	-		ABZR87_RS22225	0.63	+1.3
1,348,665	-		ABZR87_RS22225	0.63	+0.4
1,348,665	-		ABZR87_RS22225	0.63	-0.2
1,348,797	+		ABZR87_RS22225	0.81	-1.9
1,348,797	+		ABZR87_RS22225	0.81	-0.9
1,348,797	+		ABZR87_RS22225	0.81	-0.6
1,348,797	+		ABZR87_RS22225	0.81	-1.2
1,348,798	-		ABZR87_RS22225	0.81	-0.5
1,348,892	+				-0.7
1,348,892	+				-0.9
1,348,892	+				-0.0
1,348,892	+				-0.3
1,348,892	+				-0.6
1,349,117	-		ABZR87_RS22230	0.27	-0.7