Experiment: C.elegans, mixed culture-2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS20365 and ABZR87_RS20370 are separated by 14 nucleotides ABZR87_RS20370 and ABZR87_RS20375 overlap by 7 nucleotides
ABZR87_RS20365: ABZR87_RS20365 - cytochrome c, at 957,295 to 958,461
_RS20365
ABZR87_RS20370: ABZR87_RS20370 - ABC transporter ATP-binding protein, at 958,476 to 959,273
_RS20370
ABZR87_RS20375: ABZR87_RS20375 - ABC transporter permease subunit, at 959,267 to 960,304
_RS20375
Position (kb) 958
959
960 Strain fitness (log2 ratio) -2
-1
0
1 at 958.052 kb on + strand, within ABZR87_RS20365 at 958.053 kb on - strand, within ABZR87_RS20365 at 958.053 kb on - strand, within ABZR87_RS20365 at 958.053 kb on - strand, within ABZR87_RS20365 at 958.477 kb on + strand at 958.477 kb on + strand at 958.478 kb on - strand at 958.478 kb on - strand at 958.966 kb on + strand, within ABZR87_RS20370 at 959.373 kb on + strand, within ABZR87_RS20375 at 959.373 kb on + strand, within ABZR87_RS20375 at 959.373 kb on + strand, within ABZR87_RS20375 at 959.373 kb on + strand, within ABZR87_RS20375 at 959.373 kb on + strand, within ABZR87_RS20375 at 959.374 kb on - strand, within ABZR87_RS20375 at 959.374 kb on - strand, within ABZR87_RS20375 at 959.386 kb on - strand, within ABZR87_RS20375 at 959.386 kb on - strand, within ABZR87_RS20375 at 959.386 kb on - strand, within ABZR87_RS20375 at 959.415 kb on + strand, within ABZR87_RS20375 at 959.492 kb on + strand, within ABZR87_RS20375 at 959.493 kb on - strand, within ABZR87_RS20375 at 959.493 kb on - strand, within ABZR87_RS20375 at 959.583 kb on + strand, within ABZR87_RS20375 at 959.584 kb on - strand, within ABZR87_RS20375 at 959.586 kb on + strand, within ABZR87_RS20375 at 959.676 kb on + strand, within ABZR87_RS20375 at 959.694 kb on + strand, within ABZR87_RS20375 at 959.695 kb on - strand, within ABZR87_RS20375 at 959.695 kb on - strand, within ABZR87_RS20375 at 959.764 kb on - strand, within ABZR87_RS20375 at 959.854 kb on + strand, within ABZR87_RS20375 at 959.854 kb on + strand, within ABZR87_RS20375 at 959.895 kb on + strand, within ABZR87_RS20375 at 959.895 kb on + strand, within ABZR87_RS20375 at 959.895 kb on + strand, within ABZR87_RS20375 at 959.896 kb on - strand, within ABZR87_RS20375 at 959.896 kb on - strand, within ABZR87_RS20375
Per-strain Table
Position Strand Gene LocusTag Fraction C.elegans, mixed culture-2 remove 958,052 + ABZR87_RS20365 0.65 +0.6 958,053 - ABZR87_RS20365 0.65 +0.8 958,053 - ABZR87_RS20365 0.65 +0.3 958,053 - ABZR87_RS20365 0.65 -0.2 958,477 + -0.6 958,477 + -1.4 958,478 - +0.2 958,478 - -0.8 958,966 + ABZR87_RS20370 0.61 -1.2 959,373 + ABZR87_RS20375 0.10 -0.3 959,373 + ABZR87_RS20375 0.10 -0.4 959,373 + ABZR87_RS20375 0.10 +0.5 959,373 + ABZR87_RS20375 0.10 +0.4 959,373 + ABZR87_RS20375 0.10 -1.9 959,374 - ABZR87_RS20375 0.10 -1.2 959,374 - ABZR87_RS20375 0.10 +0.6 959,386 - ABZR87_RS20375 0.11 +0.0 959,386 - ABZR87_RS20375 0.11 -1.4 959,386 - ABZR87_RS20375 0.11 +0.5 959,415 + ABZR87_RS20375 0.14 +0.8 959,492 + ABZR87_RS20375 0.22 -0.3 959,493 - ABZR87_RS20375 0.22 -0.2 959,493 - ABZR87_RS20375 0.22 +0.3 959,583 + ABZR87_RS20375 0.30 +0.2 959,584 - ABZR87_RS20375 0.31 -0.0 959,586 + ABZR87_RS20375 0.31 +0.9 959,676 + ABZR87_RS20375 0.39 -0.6 959,694 + ABZR87_RS20375 0.41 -1.9 959,695 - ABZR87_RS20375 0.41 -0.3 959,695 - ABZR87_RS20375 0.41 +0.4 959,764 - ABZR87_RS20375 0.48 +1.1 959,854 + ABZR87_RS20375 0.57 -0.8 959,854 + ABZR87_RS20375 0.57 -1.0 959,895 + ABZR87_RS20375 0.61 -0.8 959,895 + ABZR87_RS20375 0.61 -0.2 959,895 + ABZR87_RS20375 0.61 +1.0 959,896 - ABZR87_RS20375 0.61 +0.2 959,896 - ABZR87_RS20375 0.61 -0.4
Or see this region's nucleotide sequence