Experiment: C.elegans, mixed culture-2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS16630 and ABZR87_RS16635 are separated by 90 nucleotides ABZR87_RS16635 and ABZR87_RS16640 are separated by 173 nucleotides ABZR87_RS16640 and ABZR87_RS16645 are separated by 2 nucleotides ABZR87_RS16645 and ABZR87_RS16650 are separated by 79 nucleotides
ABZR87_RS16630: ABZR87_RS16630 - 2-oxoglutarate dehydrogenase E1 component, at 79,890 to 82,463
_RS16630
ABZR87_RS16635: ABZR87_RS16635 - MFS family transporter, at 82,554 to 83,858
_RS16635
ABZR87_RS16640: ABZR87_RS16640 - addiction module antidote protein, at 84,032 to 84,334
_RS16640
ABZR87_RS16645: ABZR87_RS16645 - type II toxin-antitoxin system RelE/ParE family toxin, at 84,337 to 84,636
_RS16645
ABZR87_RS16650: ABZR87_RS16650 - MFS transporter, at 84,716 to 85,930
_RS16650
Position (kb) 82
83
84 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 81.570 kb on + strand, within ABZR87_RS16630 at 81.666 kb on + strand, within ABZR87_RS16630 at 81.666 kb on + strand, within ABZR87_RS16630 at 81.667 kb on - strand, within ABZR87_RS16630 at 81.667 kb on - strand, within ABZR87_RS16630 at 81.753 kb on + strand, within ABZR87_RS16630 at 81.754 kb on - strand, within ABZR87_RS16630 at 81.754 kb on - strand, within ABZR87_RS16630 at 81.771 kb on + strand, within ABZR87_RS16630 at 81.771 kb on + strand, within ABZR87_RS16630 at 81.772 kb on - strand, within ABZR87_RS16630 at 81.772 kb on - strand, within ABZR87_RS16630 at 81.772 kb on - strand, within ABZR87_RS16630 at 82.100 kb on + strand, within ABZR87_RS16630 at 82.134 kb on + strand, within ABZR87_RS16630 at 82.170 kb on - strand, within ABZR87_RS16630 at 82.203 kb on + strand, within ABZR87_RS16630 at 82.204 kb on - strand, within ABZR87_RS16630 at 82.204 kb on - strand, within ABZR87_RS16630 at 82.363 kb on + strand at 82.363 kb on + strand at 82.363 kb on + strand at 82.364 kb on - strand at 82.364 kb on - strand at 82.523 kb on - strand at 82.573 kb on + strand at 82.573 kb on + strand at 82.574 kb on - strand at 82.574 kb on - strand at 82.574 kb on - strand at 82.603 kb on + strand at 82.603 kb on + strand at 82.603 kb on + strand at 82.603 kb on + strand at 82.604 kb on - strand at 82.604 kb on - strand at 82.642 kb on + strand at 82.643 kb on - strand at 82.648 kb on + strand at 82.648 kb on + strand at 82.648 kb on + strand at 82.649 kb on - strand at 82.649 kb on - strand at 82.649 kb on - strand at 82.693 kb on + strand, within ABZR87_RS16635 at 82.693 kb on + strand, within ABZR87_RS16635 at 82.694 kb on - strand, within ABZR87_RS16635 at 82.806 kb on - strand, within ABZR87_RS16635 at 82.806 kb on - strand, within ABZR87_RS16635 at 82.807 kb on + strand, within ABZR87_RS16635 at 82.807 kb on + strand, within ABZR87_RS16635 at 82.807 kb on + strand, within ABZR87_RS16635 at 82.807 kb on + strand, within ABZR87_RS16635 at 82.807 kb on + strand, within ABZR87_RS16635 at 82.808 kb on - strand, within ABZR87_RS16635 at 82.808 kb on - strand, within ABZR87_RS16635 at 82.971 kb on + strand, within ABZR87_RS16635 at 82.972 kb on - strand, within ABZR87_RS16635 at 82.972 kb on - strand, within ABZR87_RS16635 at 82.990 kb on + strand, within ABZR87_RS16635 at 82.990 kb on + strand, within ABZR87_RS16635 at 82.990 kb on + strand, within ABZR87_RS16635 at 82.991 kb on - strand, within ABZR87_RS16635 at 82.991 kb on - strand, within ABZR87_RS16635 at 82.991 kb on - strand, within ABZR87_RS16635 at 82.991 kb on - strand, within ABZR87_RS16635 at 83.059 kb on + strand, within ABZR87_RS16635 at 83.059 kb on + strand, within ABZR87_RS16635 at 83.059 kb on + strand, within ABZR87_RS16635 at 83.059 kb on + strand, within ABZR87_RS16635 at 83.060 kb on - strand, within ABZR87_RS16635 at 83.071 kb on + strand, within ABZR87_RS16635 at 83.071 kb on + strand, within ABZR87_RS16635 at 83.071 kb on + strand, within ABZR87_RS16635 at 83.071 kb on + strand, within ABZR87_RS16635 at 83.071 kb on + strand, within ABZR87_RS16635 at 83.071 kb on + strand, within ABZR87_RS16635 at 83.072 kb on - strand, within ABZR87_RS16635 at 83.072 kb on - strand, within ABZR87_RS16635 at 83.072 kb on - strand, within ABZR87_RS16635 at 83.072 kb on - strand, within ABZR87_RS16635 at 83.072 kb on - strand, within ABZR87_RS16635 at 83.086 kb on + strand, within ABZR87_RS16635 at 83.086 kb on + strand, within ABZR87_RS16635 at 83.087 kb on - strand, within ABZR87_RS16635 at 83.087 kb on - strand, within ABZR87_RS16635 at 83.112 kb on - strand, within ABZR87_RS16635 at 83.227 kb on + strand, within ABZR87_RS16635 at 83.228 kb on - strand, within ABZR87_RS16635 at 83.228 kb on - strand, within ABZR87_RS16635 at 83.228 kb on - strand, within ABZR87_RS16635 at 83.368 kb on + strand, within ABZR87_RS16635 at 83.368 kb on + strand, within ABZR87_RS16635 at 83.368 kb on + strand, within ABZR87_RS16635 at 83.368 kb on + strand, within ABZR87_RS16635 at 83.422 kb on + strand, within ABZR87_RS16635 at 83.422 kb on + strand, within ABZR87_RS16635 at 83.422 kb on + strand, within ABZR87_RS16635 at 83.422 kb on + strand, within ABZR87_RS16635 at 83.422 kb on + strand, within ABZR87_RS16635 at 83.423 kb on - strand, within ABZR87_RS16635 at 83.423 kb on - strand, within ABZR87_RS16635 at 83.423 kb on - strand, within ABZR87_RS16635 at 83.441 kb on - strand, within ABZR87_RS16635 at 83.518 kb on + strand, within ABZR87_RS16635 at 83.518 kb on + strand, within ABZR87_RS16635 at 83.519 kb on - strand, within ABZR87_RS16635 at 83.519 kb on - strand, within ABZR87_RS16635 at 83.726 kb on - strand, within ABZR87_RS16635 at 83.743 kb on + strand at 83.743 kb on + strand at 83.749 kb on + strand at 83.749 kb on + strand at 83.749 kb on + strand at 83.749 kb on + strand at 83.749 kb on + strand at 83.749 kb on + strand at 83.750 kb on - strand at 83.750 kb on - strand at 83.750 kb on - strand at 83.750 kb on - strand at 83.853 kb on - strand at 83.853 kb on - strand at 83.853 kb on - strand at 83.894 kb on + strand at 83.895 kb on - strand at 83.997 kb on + strand at 83.997 kb on + strand at 84.034 kb on - strand at 84.034 kb on - strand at 84.034 kb on - strand at 84.034 kb on - strand at 84.034 kb on - strand at 84.034 kb on - strand at 84.126 kb on + strand, within ABZR87_RS16640 at 84.126 kb on + strand, within ABZR87_RS16640 at 84.126 kb on + strand, within ABZR87_RS16640 at 84.126 kb on + strand, within ABZR87_RS16640 at 84.126 kb on + strand, within ABZR87_RS16640 at 84.126 kb on + strand, within ABZR87_RS16640 at 84.127 kb on - strand, within ABZR87_RS16640 at 84.127 kb on - strand, within ABZR87_RS16640 at 84.191 kb on + strand, within ABZR87_RS16640 at 84.191 kb on + strand, within ABZR87_RS16640 at 84.255 kb on + strand, within ABZR87_RS16640 at 84.256 kb on - strand, within ABZR87_RS16640 at 84.256 kb on - strand, within ABZR87_RS16640 at 84.256 kb on - strand, within ABZR87_RS16640 at 84.415 kb on + strand, within ABZR87_RS16645 at 84.415 kb on + strand, within ABZR87_RS16645 at 84.415 kb on + strand, within ABZR87_RS16645 at 84.415 kb on + strand, within ABZR87_RS16645 at 84.415 kb on + strand, within ABZR87_RS16645 at 84.415 kb on + strand, within ABZR87_RS16645 at 84.415 kb on + strand, within ABZR87_RS16645 at 84.415 kb on + strand, within ABZR87_RS16645 at 84.416 kb on - strand, within ABZR87_RS16645 at 84.416 kb on - strand, within ABZR87_RS16645 at 84.416 kb on - strand, within ABZR87_RS16645 at 84.416 kb on - strand, within ABZR87_RS16645 at 84.452 kb on + strand, within ABZR87_RS16645 at 84.453 kb on - strand, within ABZR87_RS16645 at 84.453 kb on - strand, within ABZR87_RS16645 at 84.484 kb on + strand, within ABZR87_RS16645 at 84.484 kb on + strand, within ABZR87_RS16645 at 84.484 kb on + strand, within ABZR87_RS16645 at 84.484 kb on + strand, within ABZR87_RS16645 at 84.485 kb on - strand, within ABZR87_RS16645 at 84.485 kb on - strand, within ABZR87_RS16645 at 84.485 kb on - strand, within ABZR87_RS16645 at 84.485 kb on - strand, within ABZR87_RS16645 at 84.485 kb on - strand, within ABZR87_RS16645 at 84.485 kb on - strand, within ABZR87_RS16645 at 84.485 kb on - strand, within ABZR87_RS16645 at 84.485 kb on - strand, within ABZR87_RS16645 at 84.485 kb on - strand, within ABZR87_RS16645 at 84.538 kb on + strand, within ABZR87_RS16645 at 84.538 kb on + strand, within ABZR87_RS16645 at 84.538 kb on + strand, within ABZR87_RS16645 at 84.539 kb on - strand, within ABZR87_RS16645 at 84.539 kb on - strand, within ABZR87_RS16645 at 84.539 kb on - strand, within ABZR87_RS16645 at 84.553 kb on + strand, within ABZR87_RS16645 at 84.553 kb on + strand, within ABZR87_RS16645 at 84.553 kb on + strand, within ABZR87_RS16645 at 84.553 kb on + strand, within ABZR87_RS16645 at 84.618 kb on + strand at 84.618 kb on + strand at 84.618 kb on + strand at 84.618 kb on + strand at 84.619 kb on - strand at 84.619 kb on - strand at 84.619 kb on - strand at 84.619 kb on - strand at 84.619 kb on - strand at 84.718 kb on - strand at 84.718 kb on - strand at 84.837 kb on + strand at 84.837 kb on + strand at 84.838 kb on - strand, within ABZR87_RS16650
Per-strain Table
Position Strand Gene LocusTag Fraction C.elegans, mixed culture-2 remove 81,570 + ABZR87_RS16630 0.65 +1.4 81,666 + ABZR87_RS16630 0.69 +0.4 81,666 + ABZR87_RS16630 0.69 +0.1 81,667 - ABZR87_RS16630 0.69 -0.2 81,667 - ABZR87_RS16630 0.69 +1.4 81,753 + ABZR87_RS16630 0.72 -0.0 81,754 - ABZR87_RS16630 0.72 +0.6 81,754 - ABZR87_RS16630 0.72 +0.2 81,771 + ABZR87_RS16630 0.73 -0.5 81,771 + ABZR87_RS16630 0.73 -0.1 81,772 - ABZR87_RS16630 0.73 -0.1 81,772 - ABZR87_RS16630 0.73 +1.4 81,772 - ABZR87_RS16630 0.73 +0.7 82,100 + ABZR87_RS16630 0.86 -0.3 82,134 + ABZR87_RS16630 0.87 +0.4 82,170 - ABZR87_RS16630 0.89 -0.4 82,203 + ABZR87_RS16630 0.90 -0.3 82,204 - ABZR87_RS16630 0.90 +0.9 82,204 - ABZR87_RS16630 0.90 +1.7 82,363 + +0.2 82,363 + +0.4 82,363 + -0.3 82,364 - +0.4 82,364 - +0.0 82,523 - -1.0 82,573 + +0.4 82,573 + -0.5 82,574 - -1.0 82,574 - +0.1 82,574 - +0.2 82,603 + -0.1 82,603 + -0.7 82,603 + -0.5 82,603 + -0.4 82,604 - -0.1 82,604 - -1.1 82,642 + -0.9 82,643 - -0.0 82,648 + +0.6 82,648 + -1.0 82,648 + -0.3 82,649 - -0.9 82,649 - -0.2 82,649 - -1.2 82,693 + ABZR87_RS16635 0.11 +0.0 82,693 + ABZR87_RS16635 0.11 -0.9 82,694 - ABZR87_RS16635 0.11 -0.7 82,806 - ABZR87_RS16635 0.19 +1.0 82,806 - ABZR87_RS16635 0.19 +0.4 82,807 + ABZR87_RS16635 0.19 -1.4 82,807 + ABZR87_RS16635 0.19 +0.1 82,807 + ABZR87_RS16635 0.19 -0.3 82,807 + ABZR87_RS16635 0.19 -0.7 82,807 + ABZR87_RS16635 0.19 -0.8 82,808 - ABZR87_RS16635 0.19 +0.4 82,808 - ABZR87_RS16635 0.19 -0.2 82,971 + ABZR87_RS16635 0.32 -0.0 82,972 - ABZR87_RS16635 0.32 -0.7 82,972 - ABZR87_RS16635 0.32 -1.0 82,990 + ABZR87_RS16635 0.33 +0.2 82,990 + ABZR87_RS16635 0.33 -2.0 82,990 + ABZR87_RS16635 0.33 -0.4 82,991 - ABZR87_RS16635 0.33 -0.8 82,991 - ABZR87_RS16635 0.33 +0.4 82,991 - ABZR87_RS16635 0.33 -0.1 82,991 - ABZR87_RS16635 0.33 +0.2 83,059 + ABZR87_RS16635 0.39 +0.5 83,059 + ABZR87_RS16635 0.39 +0.1 83,059 + ABZR87_RS16635 0.39 -0.0 83,059 + ABZR87_RS16635 0.39 -0.6 83,060 - ABZR87_RS16635 0.39 -0.1 83,071 + ABZR87_RS16635 0.40 +0.1 83,071 + ABZR87_RS16635 0.40 +0.7 83,071 + ABZR87_RS16635 0.40 +1.3 83,071 + ABZR87_RS16635 0.40 -0.4 83,071 + ABZR87_RS16635 0.40 -0.8 83,071 + ABZR87_RS16635 0.40 -1.6 83,072 - ABZR87_RS16635 0.40 -1.3 83,072 - ABZR87_RS16635 0.40 -1.2 83,072 - ABZR87_RS16635 0.40 +0.1 83,072 - ABZR87_RS16635 0.40 -0.3 83,072 - ABZR87_RS16635 0.40 +1.3 83,086 + ABZR87_RS16635 0.41 -0.2 83,086 + ABZR87_RS16635 0.41 -0.5 83,087 - ABZR87_RS16635 0.41 +0.7 83,087 - ABZR87_RS16635 0.41 +0.4 83,112 - ABZR87_RS16635 0.43 -0.6 83,227 + ABZR87_RS16635 0.52 +0.5 83,228 - ABZR87_RS16635 0.52 +1.1 83,228 - ABZR87_RS16635 0.52 +1.5 83,228 - ABZR87_RS16635 0.52 +0.7 83,368 + ABZR87_RS16635 0.62 -0.2 83,368 + ABZR87_RS16635 0.62 -1.0 83,368 + ABZR87_RS16635 0.62 +0.4 83,368 + ABZR87_RS16635 0.62 -0.3 83,422 + ABZR87_RS16635 0.67 -1.0 83,422 + ABZR87_RS16635 0.67 +0.7 83,422 + ABZR87_RS16635 0.67 -1.3 83,422 + ABZR87_RS16635 0.67 +0.4 83,422 + ABZR87_RS16635 0.67 +0.6 83,423 - ABZR87_RS16635 0.67 -0.2 83,423 - ABZR87_RS16635 0.67 +0.0 83,423 - ABZR87_RS16635 0.67 -0.2 83,441 - ABZR87_RS16635 0.68 +0.3 83,518 + ABZR87_RS16635 0.74 +2.0 83,518 + ABZR87_RS16635 0.74 -0.5 83,519 - ABZR87_RS16635 0.74 +0.3 83,519 - ABZR87_RS16635 0.74 -0.7 83,726 - ABZR87_RS16635 0.90 +0.2 83,743 + -1.4 83,743 + +0.8 83,749 + -0.3 83,749 + -1.0 83,749 + +0.1 83,749 + +0.7 83,749 + -1.5 83,749 + -0.3 83,750 - -0.4 83,750 - -0.3 83,750 - +0.8 83,750 - -0.8 83,853 - +0.7 83,853 - -1.6 83,853 - -0.7 83,894 + +0.9 83,895 - -1.4 83,997 + -0.2 83,997 + -0.1 84,034 - +0.4 84,034 - -1.5 84,034 - +0.1 84,034 - +0.4 84,034 - -1.3 84,034 - -0.0 84,126 + ABZR87_RS16640 0.31 +0.4 84,126 + ABZR87_RS16640 0.31 +0.6 84,126 + ABZR87_RS16640 0.31 +0.0 84,126 + ABZR87_RS16640 0.31 -0.1 84,126 + ABZR87_RS16640 0.31 +0.8 84,126 + ABZR87_RS16640 0.31 +0.9 84,127 - ABZR87_RS16640 0.31 +0.4 84,127 - ABZR87_RS16640 0.31 -0.5 84,191 + ABZR87_RS16640 0.52 +1.0 84,191 + ABZR87_RS16640 0.52 +0.3 84,255 + ABZR87_RS16640 0.74 +0.0 84,256 - ABZR87_RS16640 0.74 +0.1 84,256 - ABZR87_RS16640 0.74 -0.5 84,256 - ABZR87_RS16640 0.74 -0.7 84,415 + ABZR87_RS16645 0.26 -1.8 84,415 + ABZR87_RS16645 0.26 -0.7 84,415 + ABZR87_RS16645 0.26 -0.7 84,415 + ABZR87_RS16645 0.26 -0.7 84,415 + ABZR87_RS16645 0.26 -0.4 84,415 + ABZR87_RS16645 0.26 +0.2 84,415 + ABZR87_RS16645 0.26 +0.2 84,415 + ABZR87_RS16645 0.26 -0.9 84,416 - ABZR87_RS16645 0.26 -0.7 84,416 - ABZR87_RS16645 0.26 -0.4 84,416 - ABZR87_RS16645 0.26 -0.2 84,416 - ABZR87_RS16645 0.26 +0.6 84,452 + ABZR87_RS16645 0.38 +0.2 84,453 - ABZR87_RS16645 0.39 +0.6 84,453 - ABZR87_RS16645 0.39 -1.2 84,484 + ABZR87_RS16645 0.49 +0.4 84,484 + ABZR87_RS16645 0.49 +0.4 84,484 + ABZR87_RS16645 0.49 -0.0 84,484 + ABZR87_RS16645 0.49 +0.4 84,485 - ABZR87_RS16645 0.49 -1.9 84,485 - ABZR87_RS16645 0.49 -1.2 84,485 - ABZR87_RS16645 0.49 +0.7 84,485 - ABZR87_RS16645 0.49 -0.3 84,485 - ABZR87_RS16645 0.49 -0.7 84,485 - ABZR87_RS16645 0.49 -1.1 84,485 - ABZR87_RS16645 0.49 -0.2 84,485 - ABZR87_RS16645 0.49 -2.8 84,485 - ABZR87_RS16645 0.49 -0.3 84,538 + ABZR87_RS16645 0.67 +0.1 84,538 + ABZR87_RS16645 0.67 +0.3 84,538 + ABZR87_RS16645 0.67 -0.5 84,539 - ABZR87_RS16645 0.67 +0.0 84,539 - ABZR87_RS16645 0.67 +1.3 84,539 - ABZR87_RS16645 0.67 +0.3 84,553 + ABZR87_RS16645 0.72 +0.2 84,553 + ABZR87_RS16645 0.72 +0.4 84,553 + ABZR87_RS16645 0.72 +2.4 84,553 + ABZR87_RS16645 0.72 -0.6 84,618 + +0.4 84,618 + +0.5 84,618 + -0.7 84,618 + -1.8 84,619 - +1.0 84,619 - +0.2 84,619 - +0.6 84,619 - -0.0 84,619 - -0.9 84,718 - -0.7 84,718 - -0.6 84,837 + -1.4 84,837 + +0.2 84,838 - ABZR87_RS16650 0.10 +0.3
Or see this region's nucleotide sequence