Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS16185

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
3,424,789	+		ABZR87_RS16180	0.68	+0.4
3,424,789	+		ABZR87_RS16180	0.68	-2.9
3,425,013	+		ABZR87_RS16180	0.78	-0.9
3,425,013	+		ABZR87_RS16180	0.78	-1.9
3,425,014	-		ABZR87_RS16180	0.78	-0.6
3,425,202	+		ABZR87_RS16180	0.86	-1.5
3,425,382	+				-0.4
3,425,383	-				-0.4
3,425,383	-				-1.6
3,425,535	+				-0.7
3,425,536	-				+1.1
3,425,588	-				-0.8
3,425,624	-				+0.8
3,425,644	+		ABZR87_RS16185	0.10	+1.5
3,425,645	-		ABZR87_RS16185	0.10	-0.4
3,425,730	-		ABZR87_RS16185	0.25	-0.4
3,425,730	-		ABZR87_RS16185	0.25	-1.9
3,425,864	-		ABZR87_RS16185	0.49	+0.6
3,426,165	+				+2.5
3,426,166	-				+0.1
3,426,166	-				+0.2
3,426,166	-				+0.1
3,426,272	+				-1.6
3,426,272	+				+0.9
3,426,272	+				-0.6
3,426,273	-				+0.5
3,426,273	-				-0.1
3,426,328	-				+0.8
3,426,441	+		ABZR87_RS16190	0.11	+0.8
3,426,441	+		ABZR87_RS16190	0.11	+0.6
3,426,441	+		ABZR87_RS16190	0.11	+0.2
3,426,441	+		ABZR87_RS16190	0.11	+0.3
3,426,441	+		ABZR87_RS16190	0.11	+1.3
3,426,442	-		ABZR87_RS16190	0.11	+0.8
3,426,603	+		ABZR87_RS16190	0.29	-0.8
3,426,604	-		ABZR87_RS16190	0.29	+2.4
3,426,604	-		ABZR87_RS16190	0.29	+0.6
3,426,757	-		ABZR87_RS16190	0.47	-0.6
3,426,757	-		ABZR87_RS16190	0.47	+0.3
3,426,796	-		ABZR87_RS16190	0.51	-0.9
3,426,830	+		ABZR87_RS16190	0.55	-0.2
3,426,830	+		ABZR87_RS16190	0.55	+0.0
3,426,830	+		ABZR87_RS16190	0.55	+0.4
3,427,033	-		ABZR87_RS16190	0.78	-0.8
3,427,033	-		ABZR87_RS16190	0.78	-0.2
3,427,102	-		ABZR87_RS16190	0.86	+0.5
3,427,131	+		ABZR87_RS16190	0.89	+1.4
3,427,131	+		ABZR87_RS16190	0.89	-0.1
3,427,131	+		ABZR87_RS16190	0.89	+0.2
3,427,131	+		ABZR87_RS16190	0.89	+2.9
3,427,131	+		ABZR87_RS16190	0.89	-0.7
3,427,132	-		ABZR87_RS16190	0.90	-0.2
3,427,132	-		ABZR87_RS16190	0.90	+0.1
3,427,132	-		ABZR87_RS16190	0.90	-0.1
3,427,132	-		ABZR87_RS16190	0.90	+0.4
3,427,132	-		ABZR87_RS16190	0.90	+1.9
3,427,132	-		ABZR87_RS16190	0.90	+0.5