Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS16170

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
3,420,039	+				-0.2
3,420,039	+				+0.8
3,420,138	+		ABZR87_RS16165	0.20	+0.2
3,420,708	+				-0.9
3,420,708	+				-0.7
3,420,709	-				+0.8
3,420,709	-				+0.4
3,420,709	-				-0.3
3,420,709	-				-0.4
3,420,748	+				+0.2
3,420,748	+				+0.4
3,420,749	-				-0.1
3,420,749	-				+0.8
3,420,750	+				+1.1
3,420,750	+				+1.8
3,420,751	-				-1.5
3,420,892	+				-1.4
3,420,892	+				-1.2
3,420,893	-				-1.5
3,420,894	+				-0.2
3,420,894	+				-0.4
3,421,348	+		ABZR87_RS16170	0.38	-0.4
3,421,348	+		ABZR87_RS16170	0.38	-1.9
3,421,349	-		ABZR87_RS16170	0.38	-1.1
3,421,349	-		ABZR87_RS16170	0.38	-0.9
3,421,481	+		ABZR87_RS16170	0.47	-0.1
3,421,496	+		ABZR87_RS16170	0.48	-0.2
3,421,496	+		ABZR87_RS16170	0.48	+0.2
3,421,496	+		ABZR87_RS16170	0.48	-1.9
3,421,496	+		ABZR87_RS16170	0.48	+0.9
3,421,497	-		ABZR87_RS16170	0.48	-0.3
3,421,784	-		ABZR87_RS16170	0.69	-2.2
3,421,834	-		ABZR87_RS16170	0.72	+0.0
3,421,924	+		ABZR87_RS16170	0.78	-3.1
3,422,244	+				+0.2
3,422,245	-				-1.5
3,422,341	+				+0.2
3,422,341	+				-0.3
3,422,342	-				+0.3
3,422,342	-				-0.4
3,422,463	+		ABZR87_RS16175	0.12	+1.2
3,422,463	+		ABZR87_RS16175	0.12	-0.6
3,422,464	-		ABZR87_RS16175	0.12	+0.7
3,422,464	-		ABZR87_RS16175	0.12	-0.3
3,422,464	-		ABZR87_RS16175	0.12	-3.3
3,422,464	-		ABZR87_RS16175	0.12	+0.2
3,422,552	+		ABZR87_RS16175	0.24	+1.1
3,422,552	+		ABZR87_RS16175	0.24	-0.4
3,422,553	-		ABZR87_RS16175	0.24	+0.5
3,422,553	-		ABZR87_RS16175	0.24	+0.4
3,422,553	-		ABZR87_RS16175	0.24	-0.4
3,422,594	+		ABZR87_RS16175	0.30	+1.5
3,422,594	+		ABZR87_RS16175	0.30	-1.6
3,422,595	-		ABZR87_RS16175	0.30	-1.1
3,422,595	-		ABZR87_RS16175	0.30	+0.5
3,422,595	-		ABZR87_RS16175	0.30	+0.9
3,422,764	+		ABZR87_RS16175	0.53	-0.2
3,422,804	+		ABZR87_RS16175	0.58	+0.7
3,422,804	+		ABZR87_RS16175	0.58	+0.3
3,422,804	+		ABZR87_RS16175	0.58	-0.0
3,422,805	-		ABZR87_RS16175	0.59	-0.5
3,423,105	+				-0.6
3,423,105	+				-0.1
3,423,196	+				-2.5
3,423,221	+				-0.3