Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS15250

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
3,212,875	-		ABZR87_RS15245	0.15	+1.0
3,212,882	+		ABZR87_RS15245	0.15	-1.1
3,212,882	+		ABZR87_RS15245	0.15	+0.4
3,212,882	+		ABZR87_RS15245	0.15	+0.7
3,212,882	+		ABZR87_RS15245	0.15	-0.1
3,212,882	+		ABZR87_RS15245	0.15	-0.1
3,212,882	+		ABZR87_RS15245	0.15	-0.7
3,212,883	-		ABZR87_RS15245	0.16	-0.4
3,212,883	-		ABZR87_RS15245	0.16	+0.6
3,212,883	-		ABZR87_RS15245	0.16	-1.0
3,212,883	-		ABZR87_RS15245	0.16	+0.7
3,212,883	-		ABZR87_RS15245	0.16	-0.7
3,212,883	-		ABZR87_RS15245	0.16	-0.1
3,212,975	+		ABZR87_RS15245	0.25	-1.0
3,212,975	+		ABZR87_RS15245	0.25	-1.1
3,212,976	-		ABZR87_RS15245	0.25	+0.4
3,212,976	-		ABZR87_RS15245	0.25	+0.1
3,212,976	-		ABZR87_RS15245	0.25	+0.1
3,212,976	-		ABZR87_RS15245	0.25	-0.4
3,212,976	-		ABZR87_RS15245	0.25	-0.2
3,213,065	+		ABZR87_RS15245	0.33	+0.1
3,213,065	+		ABZR87_RS15245	0.33	-0.8
3,213,066	-		ABZR87_RS15245	0.33	+0.4
3,213,066	-		ABZR87_RS15245	0.33	-0.2
3,213,066	-		ABZR87_RS15245	0.33	-0.9
3,213,066	-		ABZR87_RS15245	0.33	-0.1
3,213,080	+		ABZR87_RS15245	0.35	-1.2
3,213,080	+		ABZR87_RS15245	0.35	+0.3
3,213,080	+		ABZR87_RS15245	0.35	-0.9
3,213,081	-		ABZR87_RS15245	0.35	+0.2
3,213,081	-		ABZR87_RS15245	0.35	+0.5
3,213,081	-		ABZR87_RS15245	0.35	+0.5
3,213,081	-		ABZR87_RS15245	0.35	+0.8
3,213,081	-		ABZR87_RS15245	0.35	-0.0
3,213,251	+		ABZR87_RS15245	0.51	-0.7
3,213,251	+		ABZR87_RS15245	0.51	-0.2
3,213,252	-		ABZR87_RS15245	0.52	-0.7
3,213,252	-		ABZR87_RS15245	0.52	+0.3
3,213,341	+		ABZR87_RS15245	0.60	+0.1
3,213,342	-		ABZR87_RS15245	0.60	-0.1
3,213,342	-		ABZR87_RS15245	0.60	+1.4
3,213,371	+		ABZR87_RS15245	0.63	+0.2
3,213,372	-		ABZR87_RS15245	0.63	+0.1
3,213,410	+		ABZR87_RS15245	0.67	+0.8
3,213,410	+		ABZR87_RS15245	0.67	+0.1
3,213,410	+		ABZR87_RS15245	0.67	-0.3
3,213,411	-		ABZR87_RS15245	0.67	+0.0
3,213,411	-		ABZR87_RS15245	0.67	+0.2
3,213,411	-		ABZR87_RS15245	0.67	-0.8
3,213,411	-		ABZR87_RS15245	0.67	+0.3
3,213,411	-		ABZR87_RS15245	0.67	+0.3
3,213,411	-		ABZR87_RS15245	0.67	+1.8
3,213,411	-		ABZR87_RS15245	0.67	-0.1
3,213,411	-		ABZR87_RS15245	0.67	-0.0
3,213,411	-		ABZR87_RS15245	0.67	-0.0
3,213,431	+		ABZR87_RS15245	0.69	-0.1
3,213,431	+		ABZR87_RS15245	0.69	+0.0
3,213,432	-		ABZR87_RS15245	0.69	+1.1
3,213,432	-		ABZR87_RS15245	0.69	-0.2
3,213,524	+		ABZR87_RS15245	0.78	+1.1
3,213,525	-		ABZR87_RS15245	0.78	+0.6
3,213,525	-		ABZR87_RS15245	0.78	-0.2
3,213,776	+				-0.1
3,213,776	+				-1.0
3,213,776	+				+0.2
3,213,777	-				+0.2
3,213,777	-				+0.6
3,213,777	-				+0.8
3,213,801	-				+0.9
3,213,801	-				-0.5
3,213,801	-				+0.3
3,213,847	-				-0.9
3,213,869	+				-3.0
3,213,920	+				-2.9
3,214,115	+		ABZR87_RS15250	0.29	-1.2
3,214,116	-		ABZR87_RS15250	0.29	-1.0
3,214,220	+		ABZR87_RS15250	0.40	-1.7
3,214,220	+		ABZR87_RS15250	0.40	-1.7
3,214,220	+		ABZR87_RS15250	0.40	-0.5
3,214,220	+		ABZR87_RS15250	0.40	-0.5
3,214,221	-		ABZR87_RS15250	0.40	-3.3
3,214,221	-		ABZR87_RS15250	0.40	-0.1
3,214,221	-		ABZR87_RS15250	0.40	-1.0
3,214,221	-		ABZR87_RS15250	0.40	-1.7
3,214,343	+		ABZR87_RS15250	0.53	+0.2
3,214,343	+		ABZR87_RS15250	0.53	-0.4
3,214,343	+		ABZR87_RS15250	0.53	-1.0
3,214,343	+		ABZR87_RS15250	0.53	-0.4
3,214,344	-		ABZR87_RS15250	0.54	-1.2
3,214,344	-		ABZR87_RS15250	0.54	-0.2
3,214,344	-		ABZR87_RS15250	0.54	-0.2
3,214,344	-		ABZR87_RS15250	0.54	-0.0
3,215,070	-		ABZR87_RS15255	0.26	+0.4
3,215,294	+		ABZR87_RS15255	0.57	+0.4
3,215,294	+		ABZR87_RS15255	0.57	+0.7
3,215,294	+		ABZR87_RS15255	0.57	+1.1
3,215,294	+		ABZR87_RS15255	0.57	+0.3
3,215,294	+		ABZR87_RS15255	0.57	-1.2
3,215,294	+		ABZR87_RS15255	0.57	-1.1
3,215,294	+		ABZR87_RS15255	0.57	-0.0
3,215,294	+		ABZR87_RS15255	0.57	+0.2
3,215,294	+		ABZR87_RS15255	0.57	-1.2
3,215,294	+		ABZR87_RS15255	0.57	-0.6
3,215,294	+		ABZR87_RS15255	0.57	+0.3
3,215,411	+		ABZR87_RS15255	0.74	-0.3
3,215,412	-		ABZR87_RS15255	0.74	+0.6
3,215,554	+				+0.4
3,215,555	-				-0.0