Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS13790

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
2,908,385	+				+0.3
2,908,385	+				-0.2
2,908,385	+				-0.3
2,908,385	+				+0.9
2,908,385	+				-1.9
2,908,386	-				+0.6
2,908,397	+				+1.0
2,908,397	+				+0.3
2,908,397	+				-0.2
2,908,397	+				+0.4
2,908,397	+				+0.5
2,908,398	-				+0.0
2,908,398	-				-0.7
2,908,398	-				-0.2
2,908,398	-				+0.3
2,908,398	-				-1.1
2,908,670	+		ABZR87_RS13790	0.18	-0.4
2,908,671	-		ABZR87_RS13790	0.19	-1.3
2,908,671	-		ABZR87_RS13790	0.19	-2.5
2,908,671	-		ABZR87_RS13790	0.19	-1.7
2,908,692	-		ABZR87_RS13790	0.20	-1.0
2,908,692	-		ABZR87_RS13790	0.20	-0.0
2,908,993	+		ABZR87_RS13790	0.48	-0.9
2,908,993	+		ABZR87_RS13790	0.48	-3.0
2,908,993	+		ABZR87_RS13790	0.48	-0.9
2,908,993	+		ABZR87_RS13790	0.48	-2.1
2,908,993	+		ABZR87_RS13790	0.48	-3.1
2,908,994	-		ABZR87_RS13790	0.48	-0.9
2,908,994	-		ABZR87_RS13790	0.48	-1.6
2,908,994	-		ABZR87_RS13790	0.48	-3.3
2,908,994	-		ABZR87_RS13790	0.48	-1.5
2,909,224	+		ABZR87_RS13790	0.69	-0.1
2,909,224	+		ABZR87_RS13790	0.69	-1.0
2,909,225	-		ABZR87_RS13790	0.69	+1.2
2,909,225	-		ABZR87_RS13790	0.69	-1.1
2,909,225	-		ABZR87_RS13790	0.69	-2.4
2,909,225	-		ABZR87_RS13790	0.69	-0.5
2,909,225	-		ABZR87_RS13790	0.69	-1.5
2,909,225	-		ABZR87_RS13790	0.69	-1.2
2,909,236	+		ABZR87_RS13790	0.70	-1.4
2,909,236	+		ABZR87_RS13790	0.70	-1.6
2,909,237	-		ABZR87_RS13790	0.70	+0.5
2,909,237	-		ABZR87_RS13790	0.70	-2.3
2,909,237	-		ABZR87_RS13790	0.70	+0.5
2,909,242	+		ABZR87_RS13790	0.70	-0.9
2,909,242	+		ABZR87_RS13790	0.70	-1.7
2,909,243	-		ABZR87_RS13790	0.70	-0.1
2,909,243	-		ABZR87_RS13790	0.70	+0.0
2,909,285	-		ABZR87_RS13790	0.74	-1.9
2,909,306	+		ABZR87_RS13790	0.76	+0.5
2,909,354	-		ABZR87_RS13790	0.81	-2.7
2,909,354	-		ABZR87_RS13790	0.81	-1.0
2,909,399	+		ABZR87_RS13790	0.85	-1.6
2,909,400	-		ABZR87_RS13790	0.85	-1.3
2,909,623	+				-0.9
2,909,623	+				+0.1
2,909,628	+				-0.4
2,909,628	+				+0.5
2,909,629	-				-0.8
2,909,629	-				-0.0
2,909,629	-				-0.7
2,909,629	-				-1.1
2,909,629	-				+0.5
2,909,629	-				-1.7
2,909,855	+		ABZR87_RS13795	0.49	-0.3
2,909,855	+		ABZR87_RS13795	0.49	-0.7
2,909,856	-		ABZR87_RS13795	0.49	+0.6
2,909,856	-		ABZR87_RS13795	0.49	+0.3
2,909,897	+		ABZR87_RS13795	0.59	-0.0
2,910,073	+				+0.6
2,910,074	-				+0.7
2,910,102	+				-2.5
2,910,103	-				+0.8
2,910,103	-				+1.1
2,910,103	-				-0.9
2,910,135	-				+0.1
2,910,135	-				-0.4
2,910,189	-				+1.3
2,910,190	-				+0.2
2,910,259	+				-0.2
2,910,259	+				+0.6
2,910,260	-				+0.6
2,910,489	+		ABZR87_RS13800	0.17	+0.9
2,910,490	-		ABZR87_RS13800	0.17	+0.9
2,910,567	-		ABZR87_RS13800	0.21	+1.1
2,910,567	-		ABZR87_RS13800	0.21	+0.3
2,910,567	-		ABZR87_RS13800	0.21	-1.1
2,910,567	-		ABZR87_RS13800	0.21	-0.4