Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS12785

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
2,714,367	+				-1.1
2,714,367	+				-1.2
2,714,367	+				-0.7
2,714,368	-				+0.2
2,714,368	-				+0.7
2,714,384	+				+0.4
2,714,384	+				+0.7
2,714,385	-				-0.2
2,714,460	+				+0.1
2,714,460	+				-0.6
2,714,460	+				-0.0
2,714,460	+				+0.8
2,714,460	+				+0.3
2,714,461	-				-1.0
2,714,461	-				-0.2
2,714,461	-				+0.5
2,714,461	-				-0.9
2,714,461	-				+0.3
2,714,461	-				+0.0
2,714,521	+				-1.7
2,714,521	+				-0.6
2,714,521	+				-1.0
2,714,627	-				+0.9
2,714,627	-				+0.3
2,714,691	+		ABZR87_RS12770	0.71	+2.7
2,714,748	+				+0.6
2,714,798	+		ABZR87_RS12775	0.54	+1.2
2,714,798	+		ABZR87_RS12775	0.54	-0.5
2,714,799	-		ABZR87_RS12775	0.55	+0.7
2,714,799	-		ABZR87_RS12775	0.55	+0.8
2,714,812	+		ABZR87_RS12775	0.72	+1.2
2,714,812	+		ABZR87_RS12775	0.72	+1.2
2,714,813	-		ABZR87_RS12775	0.74	+1.8
2,714,813	-		ABZR87_RS12775	0.74	+0.6
2,714,824	+		ABZR87_RS12775	0.88	+0.1
2,714,824	+		ABZR87_RS12775	0.88	+1.2
2,714,824	+		ABZR87_RS12775	0.88	+1.9
2,714,824	+		ABZR87_RS12775	0.88	+0.6
2,714,824	+		ABZR87_RS12775	0.88	+0.6
2,714,825	-				+1.7
2,714,838	+				+0.5
2,714,839	-				+0.2
2,714,839	-				-0.4
2,714,839	-				-0.9
2,714,902	-				+0.1
2,714,906	+				+0.3
2,714,989	+		ABZR87_RS12780	0.33	-0.1
2,715,166	+				+0.2
2,715,167	-				+0.8
2,715,212	+				-0.9
2,715,212	+				+0.5
2,715,256	+				+0.8
2,715,256	+				+0.3
2,715,256	+				+0.1
2,715,256	+				+0.3
2,715,257	-				+0.1
2,715,257	-				-1.8
2,715,257	-				+1.1
2,715,266	-				+1.0
2,715,266	-				-1.0
2,715,417	+				+1.3
2,715,417	+				-0.5
2,715,417	+				+0.7
2,715,418	-				-0.1
2,715,418	-				+1.0
2,715,693	+		ABZR87_RS12785	0.15	+2.1
2,716,136	+		ABZR87_RS12785	0.33	-0.5
2,716,201	-		ABZR87_RS12785	0.36	+2.1
2,716,201	-		ABZR87_RS12785	0.36	-0.5
2,716,226	+		ABZR87_RS12785	0.37	-1.2
2,716,226	+		ABZR87_RS12785	0.37	+1.1
2,716,372	-		ABZR87_RS12785	0.43	-1.5
2,716,373	+		ABZR87_RS12785	0.43	+2.1
2,716,373	+		ABZR87_RS12785	0.43	+2.1
2,716,373	+		ABZR87_RS12785	0.43	-1.9
2,716,374	-		ABZR87_RS12785	0.43	+0.5
2,716,374	-		ABZR87_RS12785	0.43	+2.1
2,716,547	+		ABZR87_RS12785	0.50	+2.1
2,716,547	+		ABZR87_RS12785	0.50	+1.1
2,716,547	+		ABZR87_RS12785	0.50	+0.5
2,716,547	+		ABZR87_RS12785	0.50	-1.7
2,716,548	-		ABZR87_RS12785	0.50	+0.1
2,716,548	-		ABZR87_RS12785	0.50	+1.1
2,716,548	-		ABZR87_RS12785	0.50	-1.1
2,716,551	+		ABZR87_RS12785	0.51	-0.8
2,716,551	+		ABZR87_RS12785	0.51	+1.1
2,716,766	+		ABZR87_RS12785	0.59	+2.1
2,716,766	+		ABZR87_RS12785	0.59	-0.9
2,716,859	+		ABZR87_RS12785	0.63	+1.1
2,716,860	-		ABZR87_RS12785	0.63	-0.5
2,717,051	+		ABZR87_RS12785	0.71	+1.1
2,717,052	-		ABZR87_RS12785	0.71	-0.5
2,717,052	-		ABZR87_RS12785	0.71	-2.2
2,717,052	-		ABZR87_RS12785	0.71	-2.3
2,717,054	+		ABZR87_RS12785	0.71	+0.5
2,717,054	+		ABZR87_RS12785	0.71	-1.9
2,717,054	+		ABZR87_RS12785	0.71	-1.8
2,717,055	-		ABZR87_RS12785	0.71	-0.9
2,717,055	-		ABZR87_RS12785	0.71	-1.2
2,717,315	+		ABZR87_RS12785	0.82	-1.1
2,717,316	-		ABZR87_RS12785	0.82	+0.5
2,717,316	-		ABZR87_RS12785	0.82	+0.3
2,717,316	-		ABZR87_RS12785	0.82	+0.5
2,717,518	-				-0.6
2,717,531	+				-0.9
2,717,532	-				+0.1
2,717,532	-				-1.4
2,717,746	+				+1.1
2,717,768	-				+0.4
2,717,768	-				-1.0
2,717,768	-				-0.9
2,717,768	-				+0.1
2,717,775	-				+1.0
2,717,798	-				-0.7
2,717,888	+				+1.0
2,717,889	-				+0.8
2,717,951	-				+1.1
2,717,951	-				-0.5
2,717,984	+				-0.0
2,717,985	-				-1.5
2,717,985	-				-0.4
2,717,985	-				-0.3
2,718,034	+				-0.2
2,718,034	+				+1.1
2,718,034	+				-0.5
2,718,035	-				-0.2
2,718,035	-				-0.2
2,718,035	-				+0.1
2,718,035	-				+0.5
2,718,178	+		ABZR87_RS12790	0.21	+1.1
2,718,464	+		ABZR87_RS12790	0.43	+0.1
2,718,465	-		ABZR87_RS12790	0.43	+2.1
2,718,637	+		ABZR87_RS12790	0.57	+2.1
2,718,637	+		ABZR87_RS12790	0.57	-0.2
2,718,637	+		ABZR87_RS12790	0.57	+1.1
2,718,638	-		ABZR87_RS12790	0.57	-0.5
2,718,638	-		ABZR87_RS12790	0.57	-1.5
2,718,671	-		ABZR87_RS12790	0.59	-1.2
2,718,671	-		ABZR87_RS12790	0.59	-3.0
2,718,724	+		ABZR87_RS12790	0.63	-0.1
2,718,725	-		ABZR87_RS12790	0.63	+0.1