Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS11245

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
2,387,384	+				+0.2
2,387,384	+				+0.3
2,387,384	+				+0.7
2,387,385	-				+0.9
2,387,522	+		ABZR87_RS11240	0.18	+0.2
2,387,540	+		ABZR87_RS11240	0.22	-0.3
2,387,575	+		ABZR87_RS11240	0.30	-0.1
2,387,575	+		ABZR87_RS11240	0.30	-1.5
2,387,575	+		ABZR87_RS11240	0.30	+0.8
2,387,576	-		ABZR87_RS11240	0.30	-0.8
2,387,782	-		ABZR87_RS11240	0.76	-0.9
2,387,782	-		ABZR87_RS11240	0.76	-0.1
2,387,872	+				-0.3
2,387,966	+				-2.1
2,387,966	+				-0.3
2,387,966	+				+0.5
2,387,966	+				+0.7
2,387,966	+				+0.8
2,387,967	-				+0.3
2,387,967	-				+0.2
2,387,967	-				+0.4
2,387,967	-				+0.1
2,387,967	-				+0.6
2,387,971	-				+1.8
2,388,067	+				-0.5
2,388,098	+				+0.4
2,388,098	+				+1.3
2,388,098	+				+0.5
2,388,098	+				+0.5
2,388,099	-				+0.3
2,388,136	+				-0.3
2,388,136	+				-0.3
2,388,403	+		ABZR87_RS11245	0.10	-2.7
2,388,404	-		ABZR87_RS11245	0.10	-1.0
2,388,404	-		ABZR87_RS11245	0.10	-2.7
2,388,859	+		ABZR87_RS11245	0.35	-0.5
2,388,859	+		ABZR87_RS11245	0.35	-0.3
2,388,860	-		ABZR87_RS11245	0.35	+0.3
2,389,048	-		ABZR87_RS11245	0.46	+0.1
2,389,345	+		ABZR87_RS11245	0.62	-3.5
2,389,345	+		ABZR87_RS11245	0.62	-1.8
2,389,521	+		ABZR87_RS11245	0.72	+0.3
2,389,627	+		ABZR87_RS11245	0.78	-2.5
2,389,628	-		ABZR87_RS11245	0.78	-0.3
2,389,628	-		ABZR87_RS11245	0.78	-0.5
2,389,628	-		ABZR87_RS11245	0.78	-1.3
2,389,768	+		ABZR87_RS11245	0.85	-2.7
2,389,769	-		ABZR87_RS11245	0.85	-0.9
2,389,913	-				-1.4
2,390,539	+		ABZR87_RS11250	0.36	+0.2
2,390,539	+		ABZR87_RS11250	0.36	-0.8
2,390,657	-		ABZR87_RS11250	0.46	-0.2
2,390,657	-		ABZR87_RS11250	0.46	-0.3
2,390,657	-		ABZR87_RS11250	0.46	-0.3
2,390,707	+		ABZR87_RS11250	0.50	+0.2
2,390,708	-		ABZR87_RS11250	0.50	+0.3
2,390,708	-		ABZR87_RS11250	0.50	-0.5
2,390,708	-		ABZR87_RS11250	0.50	-0.6
2,390,800	+		ABZR87_RS11250	0.58	-0.4
2,390,800	+		ABZR87_RS11250	0.58	-0.1
2,390,801	-		ABZR87_RS11250	0.58	+0.8
2,390,801	-		ABZR87_RS11250	0.58	+0.8
2,390,827	+		ABZR87_RS11250	0.60	-0.0
2,390,827	+		ABZR87_RS11250	0.60	+0.1
2,390,828	-		ABZR87_RS11250	0.61	+0.1
2,390,828	-		ABZR87_RS11250	0.61	-1.9
2,390,828	-		ABZR87_RS11250	0.61	+0.3
2,390,828	-		ABZR87_RS11250	0.61	-0.3
2,390,828	-		ABZR87_RS11250	0.61	-0.2
2,390,887	+		ABZR87_RS11250	0.65	+1.3
2,390,887	+		ABZR87_RS11250	0.65	+0.1
2,390,887	+		ABZR87_RS11250	0.65	+0.4
2,390,888	-		ABZR87_RS11250	0.66	-0.3
2,390,898	+		ABZR87_RS11250	0.66	-1.3
2,390,947	+		ABZR87_RS11250	0.71	+0.4
2,390,967	+		ABZR87_RS11250	0.72	-0.3
2,390,967	+		ABZR87_RS11250	0.72	+1.1
2,390,967	+		ABZR87_RS11250	0.72	-0.5
2,390,968	-		ABZR87_RS11250	0.72	+1.5