Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS11015

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
2,331,709	+				-1.0
2,331,710	-				-0.4
2,331,786	+				+0.1
2,331,787	-				-0.3
2,331,792	+				-1.8
2,331,824	+				-0.9
2,331,824	+				+0.2
2,331,860	+		ABZR87_RS11010	0.21	-0.6
2,331,861	-		ABZR87_RS11010	0.21	+0.1
2,331,861	-		ABZR87_RS11010	0.21	-1.4
2,331,885	-		ABZR87_RS11010	0.30	-0.1
2,332,132	-				-2.5
2,332,137	-				+0.3
2,332,137	-				-0.5
2,332,161	+				-0.3
2,332,186	+				-0.5
2,332,228	+				+0.9
2,332,228	+				-0.3
2,332,451	-		ABZR87_RS11015	0.19	-0.1
2,332,456	+		ABZR87_RS11015	0.19	+0.3
2,332,456	+		ABZR87_RS11015	0.19	-0.8
2,332,624	+		ABZR87_RS11015	0.31	-3.4
2,332,624	+		ABZR87_RS11015	0.31	-1.7
2,332,625	-		ABZR87_RS11015	0.31	-1.0
2,332,625	-		ABZR87_RS11015	0.31	-1.1
2,332,765	+		ABZR87_RS11015	0.41	-2.2
2,332,766	-		ABZR87_RS11015	0.42	-1.1
2,332,766	-		ABZR87_RS11015	0.42	+0.2
2,332,768	+		ABZR87_RS11015	0.42	-1.1
2,332,768	+		ABZR87_RS11015	0.42	-2.7
2,332,769	-		ABZR87_RS11015	0.42	-1.7
2,333,446	+				-2.0
2,333,446	+				+1.0
2,333,446	+				-1.6
2,333,446	+				-1.2
2,333,622	+				-0.8
2,333,623	-				-1.5
2,333,640	+				-2.2
2,333,641	-				+0.1
2,333,641	-				-0.2
2,333,642	+				-0.5
2,333,848	+				-0.6
2,333,849	-				-1.0
2,334,029	-				+0.5
2,334,029	-				-3.0
2,334,029	-				+1.0
2,334,218	+		ABZR87_RS11020	0.14	-1.4
2,334,219	-		ABZR87_RS11020	0.14	+1.3
2,334,281	+		ABZR87_RS11020	0.16	+0.1
2,334,282	-		ABZR87_RS11020	0.16	+0.3
2,334,420	-		ABZR87_RS11020	0.19	-0.3
2,334,420	-		ABZR87_RS11020	0.19	+0.7
2,334,483	-		ABZR87_RS11020	0.21	+0.5
2,334,483	-		ABZR87_RS11020	0.21	+0.5