Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS10760

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
2,275,043	+		ABZR87_RS10755	0.12	+0.3
2,275,057	-		ABZR87_RS10755	0.14	+0.6
2,275,057	-		ABZR87_RS10755	0.14	-0.0
2,275,083	+		ABZR87_RS10755	0.18	+0.5
2,275,083	+		ABZR87_RS10755	0.18	+0.7
2,275,083	+		ABZR87_RS10755	0.18	+0.1
2,275,083	+		ABZR87_RS10755	0.18	+0.7
2,275,084	-		ABZR87_RS10755	0.18	+2.0
2,275,084	-		ABZR87_RS10755	0.18	+0.1
2,275,145	+		ABZR87_RS10755	0.28	+0.7
2,275,146	-		ABZR87_RS10755	0.28	+0.3
2,275,210	-		ABZR87_RS10755	0.37	+1.0
2,275,259	+		ABZR87_RS10755	0.45	+1.0
2,275,259	+		ABZR87_RS10755	0.45	+0.5
2,275,259	+		ABZR87_RS10755	0.45	+0.6
2,275,259	+		ABZR87_RS10755	0.45	+0.5
2,275,259	+		ABZR87_RS10755	0.45	+0.1
2,275,259	+		ABZR87_RS10755	0.45	-1.1
2,275,259	+		ABZR87_RS10755	0.45	+0.3
2,275,260	-		ABZR87_RS10755	0.45	+0.8
2,275,260	-		ABZR87_RS10755	0.45	+0.0
2,275,260	-		ABZR87_RS10755	0.45	+0.9
2,275,260	-		ABZR87_RS10755	0.45	+3.6
2,275,260	-		ABZR87_RS10755	0.45	-0.1
2,275,570	+				-0.5
2,275,590	+				-0.0
2,275,590	+				-0.5
2,275,591	-				-0.8
2,275,591	-				+0.6
2,275,591	-				-0.3
2,275,591	-				+0.5
2,275,684	+				+1.3
2,275,684	+				+0.5
2,275,684	+				+1.0
2,275,684	+				-0.2
2,275,685	-				+1.2
2,275,685	-				+0.7
2,275,719	+				+0.2
2,275,792	+				+0.7
2,275,792	+				+0.2
2,275,793	-				-0.4
2,275,793	-				+0.2
2,275,793	-				-0.5
2,275,862	-				-0.4
2,275,937	-				+0.4
2,275,945	-				-0.0
2,275,983	+				+0.3
2,275,984	-				-0.4
2,275,984	-				-0.4
2,276,124	-		ABZR87_RS10760	0.17	+0.7
2,276,124	-		ABZR87_RS10760	0.17	-0.2
2,276,190	+		ABZR87_RS10760	0.27	+1.2
2,276,190	+		ABZR87_RS10760	0.27	+0.9
2,276,191	-		ABZR87_RS10760	0.27	+2.8
2,276,290	-		ABZR87_RS10760	0.42	-0.2
2,276,363	+		ABZR87_RS10760	0.52	-0.6
2,276,363	+		ABZR87_RS10760	0.52	+0.4
2,276,363	+		ABZR87_RS10760	0.52	-0.5
2,276,363	+		ABZR87_RS10760	0.52	-1.0
2,276,363	+		ABZR87_RS10760	0.52	+0.4
2,276,363	+		ABZR87_RS10760	0.52	-0.1
2,276,363	+		ABZR87_RS10760	0.52	+0.1
2,276,363	+		ABZR87_RS10760	0.52	-0.4
2,276,364	-		ABZR87_RS10760	0.53	-1.2
2,276,364	-		ABZR87_RS10760	0.53	-0.6
2,276,364	-		ABZR87_RS10760	0.53	-0.6
2,276,365	+		ABZR87_RS10760	0.53	-1.0
2,276,365	+		ABZR87_RS10760	0.53	-1.6
2,276,365	+		ABZR87_RS10760	0.53	+0.4
2,276,365	+		ABZR87_RS10760	0.53	-1.0
2,276,365	+		ABZR87_RS10760	0.53	+0.3
2,276,365	+		ABZR87_RS10760	0.53	+0.9
2,276,365	+		ABZR87_RS10760	0.53	+0.9
2,276,366	-		ABZR87_RS10760	0.53	-0.1
2,276,366	-		ABZR87_RS10760	0.53	+0.8
2,276,366	-		ABZR87_RS10760	0.53	+0.6
2,276,366	-		ABZR87_RS10760	0.53	+0.2
2,276,366	-		ABZR87_RS10760	0.53	-0.5
2,276,422	-		ABZR87_RS10760	0.61	-1.1
2,276,547	+		ABZR87_RS10760	0.79	-0.0
2,276,612	+		ABZR87_RS10760	0.89	+0.9
2,276,613	-		ABZR87_RS10760	0.89	-0.8
2,276,613	-		ABZR87_RS10760	0.89	+0.7
2,276,711	-				-0.2
2,276,711	-				-1.8
2,276,711	-				+0.8
2,276,752	+				-1.8
2,276,752	+				-1.2
2,276,752	+				+0.8
2,276,752	+				-0.5
2,276,752	+				-0.6
2,276,753	-				+0.3
2,276,773	+				+0.8
2,276,773	+				+0.3
2,276,773	+				+0.1
2,276,821	-				+0.5
2,276,827	+				+0.6
2,276,828	-				+0.4
2,276,873	+				-0.4
2,276,873	+				+1.0
2,276,873	+				+0.0
2,276,874	-				+0.6
2,276,874	-				-0.3
2,276,965	+		ABZR87_RS10765	0.14	+0.2
2,276,965	+		ABZR87_RS10765	0.14	-1.5
2,277,051	+		ABZR87_RS10765	0.20	-0.2
2,277,051	+		ABZR87_RS10765	0.20	+0.3
2,277,051	+		ABZR87_RS10765	0.20	-0.3
2,277,052	-		ABZR87_RS10765	0.20	-0.2
2,277,071	-		ABZR87_RS10765	0.22	+0.2
2,277,338	+		ABZR87_RS10765	0.41	-0.1
2,277,438	+		ABZR87_RS10765	0.48	-0.7
2,277,449	+		ABZR87_RS10765	0.49	-0.0
2,277,450	-		ABZR87_RS10765	0.49	+0.0
2,277,450	-		ABZR87_RS10765	0.49	-2.7
2,277,450	-		ABZR87_RS10765	0.49	-0.2
2,277,450	-		ABZR87_RS10765	0.49	-0.3
2,277,450	-		ABZR87_RS10765	0.49	+1.4
2,277,470	+		ABZR87_RS10765	0.51	+1.8
2,277,471	-		ABZR87_RS10765	0.51	-0.5
2,277,626	+		ABZR87_RS10765	0.62	-0.4