Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS10700

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
2,265,318	+		ABZR87_RS10695	0.89	+0.4
2,265,318	+		ABZR87_RS10695	0.89	+0.5
2,265,318	+		ABZR87_RS10695	0.89	+0.5
2,265,318	+		ABZR87_RS10695	0.89	+0.5
2,265,319	-		ABZR87_RS10695	0.89	+0.3
2,265,319	-		ABZR87_RS10695	0.89	+1.3
2,265,319	-		ABZR87_RS10695	0.89	-0.7
2,265,322	+		ABZR87_RS10695	0.89	+1.0
2,265,322	+		ABZR87_RS10695	0.89	+0.3
2,265,322	+		ABZR87_RS10695	0.89	-0.4
2,265,322	+		ABZR87_RS10695	0.89	-0.8
2,265,323	-		ABZR87_RS10695	0.89	+0.1
2,265,323	-		ABZR87_RS10695	0.89	+0.6
2,265,323	-		ABZR87_RS10695	0.89	-0.9
2,265,323	-		ABZR87_RS10695	0.89	+0.5
2,265,323	-		ABZR87_RS10695	0.89	-0.9
2,265,323	-		ABZR87_RS10695	0.89	-2.2
2,265,323	-		ABZR87_RS10695	0.89	-0.1
2,265,323	-		ABZR87_RS10695	0.89	-2.2
2,265,323	-		ABZR87_RS10695	0.89	-1.6
2,265,323	-		ABZR87_RS10695	0.89	-1.0
2,265,323	-		ABZR87_RS10695	0.89	-1.0
2,265,444	+				+0.2
2,265,444	+				-0.2
2,265,444	+				-0.2
2,265,444	+				-0.3
2,265,445	-				-0.2
2,265,445	-				+0.4
2,265,445	-				-0.4
2,265,498	+				-0.6
2,265,566	-				-1.4
2,265,577	+				+0.9
2,265,577	+				+0.5
2,265,577	+				+0.6
2,265,578	-				-0.4
2,265,582	-				-0.7
2,265,582	-				-0.4
2,265,646	+				-0.6
2,265,668	-				-1.3
2,265,719	+				-1.8
2,265,720	-				-0.8
2,265,755	+				-1.8
2,265,777	-				-1.7
2,265,777	-				-2.7
2,265,782	+				-1.1
2,265,834	+		ABZR87_RS10700	0.14	-2.4
2,265,834	+		ABZR87_RS10700	0.14	-1.8
2,266,168	+		ABZR87_RS10700	0.66	-0.9
2,266,168	+		ABZR87_RS10700	0.66	-1.4
2,266,168	+		ABZR87_RS10700	0.66	-0.7
2,266,168	+		ABZR87_RS10700	0.66	-2.4
2,266,168	+		ABZR87_RS10700	0.66	-0.6
2,266,168	+		ABZR87_RS10700	0.66	-1.9
2,266,168	+		ABZR87_RS10700	0.66	-1.5
2,266,168	+		ABZR87_RS10700	0.66	-1.2
2,266,168	+		ABZR87_RS10700	0.66	-1.6
2,266,169	-		ABZR87_RS10700	0.66	-1.4
2,266,169	-		ABZR87_RS10700	0.66	-1.1
2,266,258	+		ABZR87_RS10700	0.80	-4.4
2,266,258	+		ABZR87_RS10700	0.80	-2.7
2,266,259	-		ABZR87_RS10700	0.80	-1.7
2,266,259	-		ABZR87_RS10700	0.80	-2.4
2,266,261	-		ABZR87_RS10700	0.80	-3.0
2,266,261	-		ABZR87_RS10700	0.80	-1.8
2,266,378	+				+1.0
2,266,378	+				-0.6
2,266,378	+				-0.3
2,266,378	+				-0.0
2,266,379	-				+0.1
2,266,379	-				+0.8
2,266,379	-				+0.4
2,266,380	-				+0.6
2,266,405	+				-0.9
2,266,405	+				+0.6
2,266,406	-				+0.3
2,266,406	-				+0.2
2,266,406	-				-0.2
2,266,422	+				-0.4
2,266,593	-		ABZR87_RS10705	0.13	-0.2
2,266,696	-		ABZR87_RS10705	0.23	-0.5
2,266,696	-		ABZR87_RS10705	0.23	-0.4
2,266,696	-		ABZR87_RS10705	0.23	-2.1
2,266,789	+		ABZR87_RS10705	0.33	+1.0
2,266,789	+		ABZR87_RS10705	0.33	-0.2
2,266,789	+		ABZR87_RS10705	0.33	-0.5
2,266,790	-		ABZR87_RS10705	0.33	-0.0
2,266,790	-		ABZR87_RS10705	0.33	+1.0
2,266,790	-		ABZR87_RS10705	0.33	+0.8
2,266,790	-		ABZR87_RS10705	0.33	-0.2
2,266,828	+		ABZR87_RS10705	0.37	+1.8
2,266,828	+		ABZR87_RS10705	0.37	+1.3
2,266,829	-		ABZR87_RS10705	0.37	+0.3
2,266,829	-		ABZR87_RS10705	0.37	+0.1
2,266,829	-		ABZR87_RS10705	0.37	+1.1
2,266,829	-		ABZR87_RS10705	0.37	-0.9
2,266,871	+		ABZR87_RS10705	0.42	-0.5
2,266,872	-		ABZR87_RS10705	0.42	-0.3
2,266,901	+		ABZR87_RS10705	0.45	-0.1
2,267,012	-		ABZR87_RS10705	0.56	-0.5
2,267,012	-		ABZR87_RS10705	0.56	+2.2
2,267,144	-		ABZR87_RS10705	0.70	+0.3
2,267,144	-		ABZR87_RS10705	0.70	+0.3
2,267,144	-		ABZR87_RS10705	0.70	-0.5
2,267,144	-		ABZR87_RS10705	0.70	+0.2
2,267,144	-		ABZR87_RS10705	0.70	+0.2
2,267,219	+		ABZR87_RS10705	0.78	+0.9
2,267,220	-		ABZR87_RS10705	0.78	-0.2
2,267,220	-		ABZR87_RS10705	0.78	+1.1