Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS10610

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
2,245,572	+				+0.5
2,245,855	-		ABZR87_RS10605	0.32	-0.8
2,245,855	-		ABZR87_RS10605	0.32	-0.6
2,245,901	+		ABZR87_RS10605	0.39	+0.9
2,246,008	+		ABZR87_RS10605	0.54	-0.3
2,246,009	-		ABZR87_RS10605	0.54	+0.1
2,246,138	+		ABZR87_RS10605	0.72	-0.1
2,246,138	+		ABZR87_RS10605	0.72	-0.1
2,246,153	+		ABZR87_RS10605	0.75	+0.6
2,246,154	-		ABZR87_RS10605	0.75	-0.3
2,246,154	-		ABZR87_RS10605	0.75	+0.2
2,246,154	-		ABZR87_RS10605	0.75	+0.6
2,246,252	+		ABZR87_RS10605	0.89	+0.7
2,246,375	+				-0.5
2,246,420	+				-0.5
2,246,421	-				+0.5
2,246,430	+				-0.4
2,246,430	+				+0.1
2,246,430	+				-1.7
2,246,431	-				+0.4
2,246,431	-				-1.0
2,246,431	-				+1.2
2,246,431	-				-1.1
2,246,462	+				+0.9
2,246,463	-				+0.7
2,246,472	+				-1.5
2,246,473	-				-0.1
2,246,647	+		ABZR87_RS10610	0.14	-0.3
2,246,833	+		ABZR87_RS10610	0.37	+0.5
2,246,833	+		ABZR87_RS10610	0.37	-2.1
2,246,986	+		ABZR87_RS10610	0.56	-1.1
2,247,414	-				-0.3
2,247,472	-				+0.5
2,247,476	+				+0.8
2,247,476	+				-0.5
2,247,476	+				-0.4
2,247,476	+				+1.8
2,247,476	+				-0.5
2,247,476	+				-0.4
2,247,477	-				-0.2
2,247,477	-				-0.0
2,247,477	-				+0.7
2,247,477	-				-0.9
2,247,477	-				+0.5
2,247,477	-				-1.7
2,247,477	-				+0.3
2,247,477	-				+1.5
2,247,477	-				-0.1
2,247,477	-				+0.5
2,247,477	-				-0.1
2,247,478	+				+0.0
2,247,478	+				-0.3
2,247,479	-				-0.7
2,247,479	-				-0.3
2,248,005	-		ABZR87_RS10615	0.58	-0.7
2,248,005	-		ABZR87_RS10615	0.58	-1.4
2,248,046	+		ABZR87_RS10615	0.63	+0.7
2,248,046	+		ABZR87_RS10615	0.63	+0.5
2,248,047	-		ABZR87_RS10615	0.63	-0.6
2,248,047	-		ABZR87_RS10615	0.63	+1.0
2,248,327	+				-1.3
2,248,328	-				+2.0