Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS09660

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
2,045,824	+		ABZR87_RS09650	0.74	-0.9
2,045,824	+		ABZR87_RS09650	0.74	+0.3
2,045,824	+		ABZR87_RS09650	0.74	+0.0
2,045,824	+		ABZR87_RS09650	0.74	-0.7
2,045,825	-		ABZR87_RS09650	0.74	-1.8
2,045,825	-		ABZR87_RS09650	0.74	-1.1
2,045,894	+		ABZR87_RS09650	0.84	+0.3
2,045,894	+		ABZR87_RS09650	0.84	+0.9
2,045,895	-		ABZR87_RS09650	0.85	+0.9
2,045,895	-		ABZR87_RS09650	0.85	+0.6
2,046,033	+				-1.2
2,046,034	-				+0.0
2,046,143	+		ABZR87_RS09655	0.25	+0.2
2,046,144	-		ABZR87_RS09655	0.25	-0.5
2,046,144	-		ABZR87_RS09655	0.25	+0.5
2,046,346	+		ABZR87_RS09655	0.57	-0.0
2,046,346	+		ABZR87_RS09655	0.57	-0.1
2,046,346	+		ABZR87_RS09655	0.57	+0.4
2,046,346	+		ABZR87_RS09655	0.57	+0.6
2,046,346	+		ABZR87_RS09655	0.57	-2.4
2,046,347	-		ABZR87_RS09655	0.58	-1.8
2,046,347	-		ABZR87_RS09655	0.58	-0.6
2,046,347	-		ABZR87_RS09655	0.58	-0.1
2,046,577	+				+0.5
2,046,577	+				-0.6
2,046,577	+				+0.2
2,046,577	+				-0.3
2,046,577	+				-0.0
2,046,578	-				-0.4
2,046,588	-				+0.6
2,046,620	+				+0.3
2,046,620	+				-0.0
2,046,620	+				+0.9
2,046,620	+				-0.2
2,046,621	-				-0.4
2,046,628	+				-0.4
2,046,628	+				-1.0
2,046,628	+				+1.0
2,046,628	+				+0.0
2,046,629	-				-0.2
2,046,629	-				-1.2
2,046,629	-				+0.5
2,046,701	+				-2.4
2,046,701	+				+0.1
2,046,702	-				+0.7
2,046,702	-				+0.7
2,046,702	-				-0.6
2,046,702	-				+0.6
2,046,702	-				+1.3
2,046,702	-				+0.2
2,046,702	-				+0.5
2,046,744	+				+0.5
2,046,859	+		ABZR87_RS09660	0.11	+0.2
2,046,860	-		ABZR87_RS09660	0.11	-0.0
2,046,860	-		ABZR87_RS09660	0.11	-0.2
2,046,860	-		ABZR87_RS09660	0.11	-1.2
2,046,999	+		ABZR87_RS09660	0.22	-1.5
2,046,999	+		ABZR87_RS09660	0.22	-0.7
2,046,999	+		ABZR87_RS09660	0.22	-0.1
2,046,999	+		ABZR87_RS09660	0.22	-0.5
2,046,999	+		ABZR87_RS09660	0.22	-0.2
2,047,000	-		ABZR87_RS09660	0.22	+0.1
2,047,089	+		ABZR87_RS09660	0.28	-1.9
2,047,089	+		ABZR87_RS09660	0.28	-0.8
2,047,089	+		ABZR87_RS09660	0.28	+0.1
2,047,089	+		ABZR87_RS09660	0.28	-0.9
2,047,089	+		ABZR87_RS09660	0.28	-0.3
2,047,089	+		ABZR87_RS09660	0.28	+0.8
2,047,090	-		ABZR87_RS09660	0.28	-1.3
2,047,261	-		ABZR87_RS09660	0.41	-0.1
2,047,261	-		ABZR87_RS09660	0.41	-1.6
2,047,310	+		ABZR87_RS09660	0.44	-0.8
2,047,310	+		ABZR87_RS09660	0.44	-0.9
2,047,311	-		ABZR87_RS09660	0.44	-3.3
2,047,311	-		ABZR87_RS09660	0.44	-0.9
2,047,311	-		ABZR87_RS09660	0.44	-0.0
2,047,383	+		ABZR87_RS09660	0.50	-1.8
2,047,384	-		ABZR87_RS09660	0.50	-0.9
2,047,518	+		ABZR87_RS09660	0.59	-0.3
2,047,544	+		ABZR87_RS09660	0.61	-0.3
2,047,544	+		ABZR87_RS09660	0.61	-0.8
2,047,544	+		ABZR87_RS09660	0.61	+0.2
2,047,544	+		ABZR87_RS09660	0.61	+0.1
2,047,544	+		ABZR87_RS09660	0.61	+0.6
2,047,544	+		ABZR87_RS09660	0.61	-0.2
2,047,545	-		ABZR87_RS09660	0.61	+0.6
2,047,643	-		ABZR87_RS09660	0.68	+0.9
2,047,646	+		ABZR87_RS09660	0.69	-1.9
2,047,647	-		ABZR87_RS09660	0.69	-0.1
2,047,647	-		ABZR87_RS09660	0.69	-1.7
2,047,647	-		ABZR87_RS09660	0.69	-1.2
2,047,647	-		ABZR87_RS09660	0.69	+0.0
2,047,704	+		ABZR87_RS09660	0.73	-0.1
2,047,704	+		ABZR87_RS09660	0.73	-1.0
2,047,869	+		ABZR87_RS09660	0.85	-0.5
2,047,869	+		ABZR87_RS09660	0.85	-0.1
2,047,869	+		ABZR87_RS09660	0.85	-0.1
2,047,869	+		ABZR87_RS09660	0.85	-0.6
2,047,870	-		ABZR87_RS09660	0.85	-0.5
2,047,885	-		ABZR87_RS09660	0.86	-1.0
2,048,142	-				-0.3
2,048,644	-				-1.7
2,048,644	-				+0.0
2,048,644	-				-0.1
2,048,650	-				+0.3
2,048,650	-				+0.4
2,048,650	-				+0.7