Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS09640

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
2,042,406	+				+2.1
2,042,407	-				-0.0
2,042,407	-				+0.0
2,042,421	-				-0.4
2,042,421	-				-0.4
2,042,550	-		ABZR87_RS09635	0.14	-1.8
2,042,550	-		ABZR87_RS09635	0.14	-1.8
2,042,694	-		ABZR87_RS09635	0.29	-1.6
2,042,694	-		ABZR87_RS09635	0.29	-1.3
2,043,195	-		ABZR87_RS09635	0.82	+1.0
2,043,195	-		ABZR87_RS09635	0.82	-0.8
2,043,281	+				+0.2
2,043,281	+				-0.3
2,043,282	-				-1.7
2,043,421	+				-0.9
2,043,424	+				-0.2
2,043,424	+				-2.3
2,043,425	-				-0.8
2,043,425	-				-1.6
2,043,425	-				-0.6
2,043,436	+				+2.0
2,043,436	+				-2.3
2,043,437	-				-0.0
2,043,544	+		ABZR87_RS09640	0.14	-1.0
2,043,545	-		ABZR87_RS09640	0.14	-1.1
2,043,680	-		ABZR87_RS09640	0.25	-0.9
2,043,680	-		ABZR87_RS09640	0.25	+1.2
2,043,887	-		ABZR87_RS09640	0.42	-0.8
2,044,018	+		ABZR87_RS09640	0.52	-0.0
2,044,018	+		ABZR87_RS09640	0.52	-1.9
2,044,043	-		ABZR87_RS09640	0.54	+1.7
2,044,043	-		ABZR87_RS09640	0.54	-0.0
2,044,090	+		ABZR87_RS09640	0.58	-1.9
2,044,091	-		ABZR87_RS09640	0.58	-1.1
2,044,091	-		ABZR87_RS09640	0.58	-1.6
2,044,255	+		ABZR87_RS09640	0.71	-2.7
2,044,256	-		ABZR87_RS09640	0.71	-0.0
2,044,321	+		ABZR87_RS09640	0.76	-0.3
2,044,457	-		ABZR87_RS09640	0.87	+0.4
2,044,457	-		ABZR87_RS09640	0.87	-1.1
2,044,611	-				+0.1
2,044,622	+				-0.3
2,044,622	+				-1.8
2,044,622	+				-1.3
2,044,636	+				-0.8
2,044,637	-				-0.4
2,044,637	-				-0.3
2,044,643	+				-0.9
2,044,643	+				-2.0
2,044,643	+				-0.8
2,044,643	+				-1.5
2,044,657	-				-0.8
2,045,424	-		ABZR87_RS09650	0.12	+0.0
2,045,424	-		ABZR87_RS09650	0.12	-0.4
2,045,424	-		ABZR87_RS09650	0.12	-1.0
2,045,424	-		ABZR87_RS09650	0.12	+0.7
2,045,450	+		ABZR87_RS09650	0.16	+1.2
2,045,450	+		ABZR87_RS09650	0.16	-0.8