Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS09440

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
2,005,098	+				-1.2
2,005,098	+				+0.3
2,005,098	+				-0.4
2,005,099	-				-0.4
2,005,099	-				-1.1
2,005,099	-				-0.9
2,005,099	-				+0.9
2,005,102	+				-1.5
2,005,102	+				+0.4
2,005,102	+				+0.2
2,005,102	+				+0.2
2,005,102	+				+0.6
2,005,103	-				-1.2
2,005,103	-				+0.4
2,005,125	+				+0.4
2,005,126	-				-0.5
2,005,212	-				-1.5
2,005,584	-		ABZR87_RS09440	0.63	+2.0
2,005,601	+		ABZR87_RS09440	0.66	-1.2
2,005,601	+		ABZR87_RS09440	0.66	-1.2
2,005,602	-		ABZR87_RS09440	0.66	-1.1
2,005,602	-		ABZR87_RS09440	0.66	+0.2
2,005,602	-		ABZR87_RS09440	0.66	+1.0
2,005,602	-		ABZR87_RS09440	0.66	-2.7
2,005,602	-		ABZR87_RS09440	0.66	-2.3
2,005,604	+		ABZR87_RS09440	0.67	-2.2
2,005,605	-		ABZR87_RS09440	0.67	-1.1
2,005,687	+		ABZR87_RS09440	0.82	-2.1
2,005,687	+		ABZR87_RS09440	0.82	-1.1
2,005,687	+		ABZR87_RS09440	0.82	+0.0
2,005,687	+		ABZR87_RS09440	0.82	-1.3
2,005,688	-		ABZR87_RS09440	0.82	-0.8
2,005,688	-		ABZR87_RS09440	0.82	-1.6
2,005,721	+		ABZR87_RS09440	0.88	-1.0
2,005,722	-		ABZR87_RS09440	0.88	-0.4
2,005,722	-		ABZR87_RS09440	0.88	-1.0
2,005,722	-		ABZR87_RS09440	0.88	+0.4
2,005,722	-		ABZR87_RS09440	0.88	-1.2
2,005,787	+				-0.1
2,005,787	+				-0.8
2,005,787	+				-0.1
2,005,787	+				-0.4
2,005,800	+				+0.8
2,005,801	-				+0.7
2,005,844	+				-2.7
2,005,845	-				-0.2
2,005,848	+				-0.6
2,005,848	+				-0.0
2,005,902	+				-0.8
2,005,903	-				-0.6
2,005,948	+				-0.4
2,005,948	+				-0.4
2,005,948	+				-1.6
2,005,949	-				+1.7
2,006,233	+		ABZR87_RS09445	0.29	-1.5
2,006,233	+		ABZR87_RS09445	0.29	-0.8
2,006,234	-		ABZR87_RS09445	0.29	-0.5
2,006,234	-		ABZR87_RS09445	0.29	+0.2
2,006,285	-		ABZR87_RS09445	0.34	+1.4
2,006,331	+		ABZR87_RS09445	0.38	-0.3
2,006,332	-		ABZR87_RS09445	0.38	+0.8
2,006,332	-		ABZR87_RS09445	0.38	+0.7
2,006,332	-		ABZR87_RS09445	0.38	+1.2
2,006,345	+		ABZR87_RS09445	0.39	-0.3
2,006,346	-		ABZR87_RS09445	0.39	-1.4
2,006,377	+		ABZR87_RS09445	0.42	-0.8
2,006,378	-		ABZR87_RS09445	0.42	+1.0
2,006,378	-		ABZR87_RS09445	0.42	-0.2
2,006,378	-		ABZR87_RS09445	0.42	+0.3
2,006,478	+		ABZR87_RS09445	0.51	-0.8
2,006,478	+		ABZR87_RS09445	0.51	-0.6
2,006,479	-		ABZR87_RS09445	0.51	+2.0
2,006,527	+		ABZR87_RS09445	0.55	+0.1
2,006,527	+		ABZR87_RS09445	0.55	-0.9
2,006,662	+		ABZR87_RS09445	0.67	+0.4
2,006,662	+		ABZR87_RS09445	0.67	+1.4
2,006,662	+		ABZR87_RS09445	0.67	-0.4
2,006,663	-		ABZR87_RS09445	0.67	+0.8
2,006,663	-		ABZR87_RS09445	0.67	-0.9
2,006,663	-		ABZR87_RS09445	0.67	-0.7
2,006,663	-		ABZR87_RS09445	0.67	-0.8
2,006,663	-		ABZR87_RS09445	0.67	-1.0
2,006,680	+		ABZR87_RS09445	0.68	-0.5
2,006,680	+		ABZR87_RS09445	0.68	-0.6
2,006,680	+		ABZR87_RS09445	0.68	-1.6
2,006,680	+		ABZR87_RS09445	0.68	-0.0
2,006,680	+		ABZR87_RS09445	0.68	-0.7
2,006,680	+		ABZR87_RS09445	0.68	-0.4
2,006,681	-		ABZR87_RS09445	0.68	-2.0
2,006,681	-		ABZR87_RS09445	0.68	-0.5
2,006,681	-		ABZR87_RS09445	0.68	-1.8
2,006,681	-		ABZR87_RS09445	0.68	+0.5
2,006,681	-		ABZR87_RS09445	0.68	-0.1
2,006,681	-		ABZR87_RS09445	0.68	-1.3
2,006,681	-		ABZR87_RS09445	0.68	-0.0
2,006,681	-		ABZR87_RS09445	0.68	-0.6
2,006,685	+		ABZR87_RS09445	0.69	+0.4
2,006,686	-		ABZR87_RS09445	0.69	+0.4
2,006,689	+		ABZR87_RS09445	0.69	+0.5
2,006,689	+		ABZR87_RS09445	0.69	+1.5
2,006,689	+		ABZR87_RS09445	0.69	-0.6
2,006,779	+		ABZR87_RS09445	0.77	-0.4
2,006,787	+		ABZR87_RS09445	0.78	+0.4