Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS09050

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
1,917,528	+		ABZR87_RS09045	0.24	+0.9
1,917,528	+		ABZR87_RS09045	0.24	+0.4
1,917,528	+		ABZR87_RS09045	0.24	+3.5
1,917,528	+		ABZR87_RS09045	0.24	+0.5
1,917,529	-		ABZR87_RS09045	0.24	-2.2
1,917,534	+		ABZR87_RS09045	0.24	-0.7
1,917,535	-		ABZR87_RS09045	0.24	+0.9
1,917,907	-		ABZR87_RS09045	0.56	-1.5
1,917,907	-		ABZR87_RS09045	0.56	-0.4
1,917,907	-		ABZR87_RS09045	0.56	+1.5
1,917,940	+		ABZR87_RS09045	0.59	+0.2
1,917,941	-		ABZR87_RS09045	0.59	+0.3
1,917,954	+		ABZR87_RS09045	0.60	+0.0
1,918,219	+		ABZR87_RS09045	0.82	-1.1
1,918,219	+		ABZR87_RS09045	0.82	-0.2
1,918,219	+		ABZR87_RS09045	0.82	+0.7
1,918,220	-		ABZR87_RS09045	0.83	+0.9
1,918,220	-		ABZR87_RS09045	0.83	+0.4
1,918,220	-		ABZR87_RS09045	0.83	+1.3
1,918,334	+				+0.4
1,918,335	-				+0.4
1,918,335	-				-0.4
1,918,335	-				+0.2
1,918,335	-				+0.6
1,918,356	+				-0.5
1,918,416	+				-0.1
1,918,416	+				+0.0
1,918,416	+				+0.5
1,918,416	+				+0.9
1,918,416	+				-0.6
1,918,416	+				+1.9
1,918,417	-				+0.0
1,918,417	-				+0.1
1,918,417	-				+0.2
1,918,430	+				+0.1
1,918,431	-				+0.3
1,918,478	+				+0.0
1,918,479	-				-0.0
1,918,479	-				-0.4
1,918,494	+				-0.6
1,918,495	-				+1.1
1,918,508	+				-0.2
1,918,508	+				-0.7
1,918,508	+				-0.3
1,918,508	+				-0.1
1,918,508	+				-0.2
1,918,508	+				-2.4
1,918,508	+				-1.3
1,918,509	-				+0.0
1,918,509	-				+0.4
1,918,898	+		ABZR87_RS09050	0.42	+1.2
1,918,899	-		ABZR87_RS09050	0.42	+1.4
1,918,899	-		ABZR87_RS09050	0.42	+0.3
1,918,899	-		ABZR87_RS09050	0.42	-0.2
1,918,968	+		ABZR87_RS09050	0.50	-1.5
1,918,969	-		ABZR87_RS09050	0.50	+0.4
1,918,969	-		ABZR87_RS09050	0.50	-1.0
1,918,969	-		ABZR87_RS09050	0.50	+0.1
1,919,051	+		ABZR87_RS09050	0.59	+0.9
1,919,051	+		ABZR87_RS09050	0.59	-0.6
1,919,051	+		ABZR87_RS09050	0.59	+0.1
1,919,051	+		ABZR87_RS09050	0.59	-0.2
1,919,051	+		ABZR87_RS09050	0.59	+0.2
1,919,052	-		ABZR87_RS09050	0.59	+0.2
1,919,052	-		ABZR87_RS09050	0.59	+0.0
1,919,052	-		ABZR87_RS09050	0.59	+1.2
1,919,052	-		ABZR87_RS09050	0.59	-1.3
1,919,052	-		ABZR87_RS09050	0.59	-0.1
1,919,052	-		ABZR87_RS09050	0.59	-0.1
1,919,052	-		ABZR87_RS09050	0.59	-0.2
1,919,052	-		ABZR87_RS09050	0.59	-0.4
1,919,057	+		ABZR87_RS09050	0.60	+0.1
1,919,057	+		ABZR87_RS09050	0.60	-1.8
1,919,057	+		ABZR87_RS09050	0.60	+0.6
1,919,057	+		ABZR87_RS09050	0.60	+0.1
1,919,058	-		ABZR87_RS09050	0.60	-1.7
1,919,058	-		ABZR87_RS09050	0.60	-0.1
1,919,058	-		ABZR87_RS09050	0.60	-0.1
1,919,058	-		ABZR87_RS09050	0.60	-0.9
1,919,063	+		ABZR87_RS09050	0.60	-0.2
1,919,291	+		ABZR87_RS09050	0.85	+0.7
1,919,291	+		ABZR87_RS09050	0.85	-1.5
1,919,292	-		ABZR87_RS09050	0.85	-2.4
1,919,376	-				+1.0
1,919,439	-				-0.8
1,919,522	+		ABZR87_RS09055	0.18	-0.3
1,919,522	+		ABZR87_RS09055	0.18	+0.3
1,919,522	+		ABZR87_RS09055	0.18	+0.2
1,919,523	-		ABZR87_RS09055	0.19	+0.5
1,919,523	-		ABZR87_RS09055	0.19	-1.2
1,919,556	-		ABZR87_RS09055	0.26	+0.3
1,919,591	+		ABZR87_RS09055	0.33	-2.5
1,919,591	+		ABZR87_RS09055	0.33	-0.6
1,919,591	+		ABZR87_RS09055	0.33	+0.0
1,919,592	-		ABZR87_RS09055	0.34	-0.1
1,919,592	-		ABZR87_RS09055	0.34	+1.1
1,919,592	-		ABZR87_RS09055	0.34	+0.8
1,919,592	-		ABZR87_RS09055	0.34	+0.4
1,919,901	+				+0.2
1,919,901	+				+0.9
1,919,901	+				+0.9
1,919,902	-				+0.3
1,919,902	-				-1.7
1,919,902	-				-0.4
1,919,902	-				+0.4
1,919,902	-				+1.4
1,919,971	-				-0.6
1,920,158	+		ABZR87_RS09060	0.32	+0.6
1,920,327	+		ABZR87_RS09060	0.53	+0.4
1,920,327	+		ABZR87_RS09060	0.53	+0.5
1,920,327	+		ABZR87_RS09060	0.53	-1.7
1,920,328	-		ABZR87_RS09060	0.53	-0.6
1,920,328	-		ABZR87_RS09060	0.53	-0.3
1,920,339	+		ABZR87_RS09060	0.54	-0.4