Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS08120

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
1,724,315	+		ABZR87_RS08115	0.65	+0.2
1,724,478	+		ABZR87_RS08115	0.71	+0.2
1,724,479	-		ABZR87_RS08115	0.71	+0.5
1,724,479	-		ABZR87_RS08115	0.71	-2.0
1,724,479	-		ABZR87_RS08115	0.71	+0.6
1,724,704	-		ABZR87_RS08115	0.80	-0.9
1,724,928	+		ABZR87_RS08115	0.88	+0.9
1,724,929	-		ABZR87_RS08115	0.88	-0.5
1,724,929	-		ABZR87_RS08115	0.88	+1.0
1,724,964	+		ABZR87_RS08115	0.90	-0.1
1,724,964	+		ABZR87_RS08115	0.90	-0.1
1,724,964	+		ABZR87_RS08115	0.90	-0.1
1,725,055	+				-1.5
1,725,056	-				+0.4
1,725,056	-				-0.3
1,725,081	+				-0.0
1,725,082	-				+0.3
1,725,082	-				-0.5
1,725,082	-				-0.0
1,725,250	-				-0.3
1,725,358	+		ABZR87_RS08120	0.12	-0.8
1,725,528	+		ABZR87_RS08120	0.31	-0.7
1,725,676	+		ABZR87_RS08120	0.47	+0.3
1,725,676	+		ABZR87_RS08120	0.47	-0.6
1,725,676	+		ABZR87_RS08120	0.47	+0.2
1,725,676	+		ABZR87_RS08120	0.47	+0.9
1,725,677	-		ABZR87_RS08120	0.47	-1.1
1,725,677	-		ABZR87_RS08120	0.47	-1.3
1,725,795	+		ABZR87_RS08120	0.60	-0.1
1,725,839	-		ABZR87_RS08120	0.65	-0.8
1,725,847	-		ABZR87_RS08120	0.65	-0.1
1,725,847	-		ABZR87_RS08120	0.65	+0.1
1,725,872	+		ABZR87_RS08120	0.68	-1.1
1,725,872	+		ABZR87_RS08120	0.68	-0.4
1,725,872	+		ABZR87_RS08120	0.68	-0.5
1,725,873	-		ABZR87_RS08120	0.68	-1.3
1,725,873	-		ABZR87_RS08120	0.68	-0.3
1,725,873	-		ABZR87_RS08120	0.68	+0.9
1,725,948	+		ABZR87_RS08120	0.77	-0.8
1,725,948	+		ABZR87_RS08120	0.77	-0.4
1,725,948	+		ABZR87_RS08120	0.77	-0.2
1,725,949	-		ABZR87_RS08120	0.77	-0.8
1,725,949	-		ABZR87_RS08120	0.77	-2.7
1,725,949	-		ABZR87_RS08120	0.77	-0.3
1,725,963	+		ABZR87_RS08120	0.78	-0.3
1,725,963	+		ABZR87_RS08120	0.78	-2.5
1,725,969	+		ABZR87_RS08120	0.79	-0.1
1,725,969	+		ABZR87_RS08120	0.79	+0.3
1,725,970	-		ABZR87_RS08120	0.79	-0.4
1,726,114	+				+0.5
1,726,237	+				+0.2
1,726,237	+				-0.4
1,726,237	+				+0.3
1,726,238	-				+0.2
1,726,238	-				+0.5
1,726,238	-				-0.4
1,726,238	-				+0.5
1,726,238	-				-1.4
1,726,238	-				-3.4
1,726,259	+				-0.4
1,726,260	-				-0.7
1,726,260	-				+0.4
1,726,331	+				+0.2
1,726,332	-				+0.6
1,726,640	+		ABZR87_RS08125	0.27	+0.5
1,726,640	+		ABZR87_RS08125	0.27	-0.4
1,727,015	+		ABZR87_RS08125	0.59	-0.2
1,727,015	+		ABZR87_RS08125	0.59	+1.2
1,727,015	+		ABZR87_RS08125	0.59	+0.2
1,727,015	+		ABZR87_RS08125	0.59	-0.6
1,727,016	-		ABZR87_RS08125	0.59	-0.4
1,727,033	+		ABZR87_RS08125	0.60	-0.9
1,727,033	+		ABZR87_RS08125	0.60	-0.3
1,727,033	+		ABZR87_RS08125	0.60	-0.5
1,727,033	+		ABZR87_RS08125	0.60	-0.4
1,727,034	-		ABZR87_RS08125	0.60	-1.1
1,727,034	-		ABZR87_RS08125	0.60	-0.4
1,727,034	-		ABZR87_RS08125	0.60	-1.8
1,727,034	-		ABZR87_RS08125	0.60	+1.7
1,727,034	-		ABZR87_RS08125	0.60	-1.0
1,727,034	-		ABZR87_RS08125	0.60	-1.3
1,727,034	-		ABZR87_RS08125	0.60	+0.6
1,727,082	-		ABZR87_RS08125	0.64	-0.7