Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS06550

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
1,393,474	+		ABZR87_RS06540	0.77	-0.7
1,393,475	-		ABZR87_RS06540	0.77	-2.0
1,393,507	+		ABZR87_RS06540	0.79	-0.8
1,393,507	+		ABZR87_RS06540	0.79	-0.7
1,393,507	+		ABZR87_RS06540	0.79	+0.1
1,393,508	-		ABZR87_RS06540	0.79	+0.8
1,393,508	-		ABZR87_RS06540	0.79	-0.2
1,393,508	-		ABZR87_RS06540	0.79	+0.7
1,393,567	+		ABZR87_RS06540	0.82	-0.6
1,393,568	-		ABZR87_RS06540	0.82	+0.5
1,393,568	-		ABZR87_RS06540	0.82	-0.3
1,393,568	-		ABZR87_RS06540	0.82	-0.4
1,393,678	+		ABZR87_RS06540	0.87	+0.9
1,393,679	-		ABZR87_RS06540	0.87	+0.3
1,393,679	-		ABZR87_RS06540	0.87	-1.3
1,393,679	-		ABZR87_RS06540	0.87	-0.1
1,393,685	+		ABZR87_RS06540	0.87	-2.2
1,393,685	+		ABZR87_RS06540	0.87	+0.1
1,393,686	-		ABZR87_RS06540	0.87	+0.3
1,393,686	-		ABZR87_RS06540	0.87	-0.6
1,393,735	-		ABZR87_RS06540	0.90	-2.0
1,393,759	+				+0.1
1,393,759	+				-0.9
1,393,759	+				+0.1
1,393,760	-				-0.3
1,393,760	-				+0.7
1,393,813	+				-0.5
1,393,814	-				-0.1
1,393,814	-				+0.4
1,393,814	-				-0.5
1,393,814	-				-0.7
1,393,843	+				-0.1
1,393,844	-				-0.3
1,393,844	-				-1.0
1,393,948	+				-1.0
1,393,949	-				+0.9
1,393,949	-				+0.1
1,394,039	+				-0.3
1,394,054	+				-0.4
1,394,054	+				-1.5
1,394,055	-				-1.8
1,394,123	+				-0.6
1,394,124	-				-0.2
1,394,278	+		ABZR87_RS06545	0.49	-1.0
1,394,278	+		ABZR87_RS06545	0.49	+1.7
1,394,278	+		ABZR87_RS06545	0.49	+2.4
1,394,279	-		ABZR87_RS06545	0.49	-0.2
1,394,317	+		ABZR87_RS06545	0.62	-0.0
1,394,317	+		ABZR87_RS06545	0.62	-2.2
1,394,317	+		ABZR87_RS06545	0.62	-1.4
1,394,317	+		ABZR87_RS06545	0.62	-1.7
1,394,318	-		ABZR87_RS06545	0.62	-1.5
1,394,339	-		ABZR87_RS06545	0.69	-2.7
1,394,410	+				-1.0
1,394,410	+				-1.6
1,394,410	+				-1.0
1,394,410	+				-0.2
1,394,411	-				-0.4
1,394,411	-				-2.7
1,394,550	+		ABZR87_RS06550	0.11	-1.0
1,394,550	+		ABZR87_RS06550	0.11	-0.9
1,394,550	+		ABZR87_RS06550	0.11	-0.8
1,394,550	+		ABZR87_RS06550	0.11	-0.2
1,394,551	-		ABZR87_RS06550	0.11	-0.9
1,394,551	-		ABZR87_RS06550	0.11	-0.4
1,394,551	-		ABZR87_RS06550	0.11	-0.7
1,394,551	-		ABZR87_RS06550	0.11	-0.9
1,394,551	-		ABZR87_RS06550	0.11	-1.4
1,394,607	+		ABZR87_RS06550	0.17	-0.5
1,394,607	+		ABZR87_RS06550	0.17	+0.2
1,394,607	+		ABZR87_RS06550	0.17	-2.9
1,394,607	+		ABZR87_RS06550	0.17	-0.5
1,394,608	-		ABZR87_RS06550	0.17	-1.3
1,394,661	+		ABZR87_RS06550	0.22	-0.0
1,394,661	+		ABZR87_RS06550	0.22	-1.0
1,394,661	+		ABZR87_RS06550	0.22	-0.2
1,394,662	-		ABZR87_RS06550	0.22	-1.0
1,394,811	+		ABZR87_RS06550	0.36	-0.6
1,394,811	+		ABZR87_RS06550	0.36	-1.4
1,394,811	+		ABZR87_RS06550	0.36	-0.8
1,394,812	-		ABZR87_RS06550	0.36	+0.2
1,394,812	-		ABZR87_RS06550	0.36	-2.6
1,394,812	-		ABZR87_RS06550	0.36	-0.5
1,394,812	-		ABZR87_RS06550	0.36	-2.6
1,394,985	+		ABZR87_RS06550	0.52	-1.3
1,394,985	+		ABZR87_RS06550	0.52	-1.4
1,394,985	+		ABZR87_RS06550	0.52	-1.9
1,394,985	+		ABZR87_RS06550	0.52	-2.0
1,394,985	+		ABZR87_RS06550	0.52	-0.0
1,394,986	-		ABZR87_RS06550	0.52	-1.0
1,395,054	+		ABZR87_RS06550	0.58	-1.5
1,395,054	+		ABZR87_RS06550	0.58	-0.8
1,395,054	+		ABZR87_RS06550	0.58	-0.2
1,395,090	+		ABZR87_RS06550	0.62	-0.4
1,395,091	-		ABZR87_RS06550	0.62	+2.8
1,395,091	-		ABZR87_RS06550	0.62	-1.8
1,395,129	+		ABZR87_RS06550	0.65	-1.0
1,395,129	+		ABZR87_RS06550	0.65	-1.0
1,395,129	+		ABZR87_RS06550	0.65	-0.7
1,395,130	-		ABZR87_RS06550	0.65	-0.6
1,395,130	-		ABZR87_RS06550	0.65	-2.5
1,395,130	-		ABZR87_RS06550	0.65	-0.6
1,395,130	-		ABZR87_RS06550	0.65	-0.4
1,395,130	-		ABZR87_RS06550	0.65	-0.2
1,395,130	-		ABZR87_RS06550	0.65	-0.7
1,395,130	-		ABZR87_RS06550	0.65	-1.4
1,395,144	+		ABZR87_RS06550	0.67	-1.5
1,395,144	+		ABZR87_RS06550	0.67	-1.3
1,395,144	+		ABZR87_RS06550	0.67	-1.6
1,395,144	+		ABZR87_RS06550	0.67	-1.1
1,395,144	+		ABZR87_RS06550	0.67	-1.5
1,395,145	-		ABZR87_RS06550	0.67	-0.8
1,395,145	-		ABZR87_RS06550	0.67	+0.6
1,395,145	-		ABZR87_RS06550	0.67	-1.9
1,395,192	+		ABZR87_RS06550	0.71	+0.0
1,395,192	+		ABZR87_RS06550	0.71	-1.5
1,395,193	-		ABZR87_RS06550	0.71	+0.3
1,395,193	-		ABZR87_RS06550	0.71	-0.1
1,395,193	-		ABZR87_RS06550	0.71	-2.7
1,395,193	-		ABZR87_RS06550	0.71	-1.5
1,395,234	+		ABZR87_RS06550	0.75	-1.8
1,395,234	+		ABZR87_RS06550	0.75	-0.1
1,395,234	+		ABZR87_RS06550	0.75	-1.3
1,395,235	-		ABZR87_RS06550	0.75	-0.7
1,395,235	-		ABZR87_RS06550	0.75	-0.6
1,395,235	-		ABZR87_RS06550	0.75	-0.7
1,395,399	+				-2.9
1,395,399	+				-1.3
1,395,399	+				-1.0
1,395,400	-				+0.1
1,395,429	-				-0.8
1,395,518	+				-1.3
1,395,519	-				+0.4
1,395,519	-				+0.1
1,395,569	-				-0.9
1,395,569	-				-1.2
1,395,573	+				+0.1
1,395,573	+				+0.1
1,395,574	-				+0.1
1,395,588	+				-2.3
1,395,595	+				+0.6
1,395,595	+				-0.8
1,395,596	-				+1.1
1,395,685	+				+0.2
1,395,686	-				-0.1
1,395,693	+				-1.2
1,395,693	+				-1.2
1,395,693	+				-0.6
1,395,694	-				+0.1
1,395,694	-				-0.2
1,395,694	-				+0.5
1,395,730	+				-1.3
1,395,731	-				-0.3
1,395,731	-				+1.2
1,395,731	-				+0.7
1,395,731	-				+0.8
1,395,731	-				+0.4
1,395,795	-				+0.1
1,395,815	+				-0.9
1,395,816	-				-0.7
1,395,816	-				+0.6
1,395,837	+		ABZR87_RS06555	0.10	+0.2
1,395,837	+		ABZR87_RS06555	0.10	-1.0
1,395,837	+		ABZR87_RS06555	0.10	-0.6
1,395,837	+		ABZR87_RS06555	0.10	-0.5
1,395,837	+		ABZR87_RS06555	0.10	-1.4
1,395,837	+		ABZR87_RS06555	0.10	-1.0
1,395,837	+		ABZR87_RS06555	0.10	-1.7
1,395,837	+		ABZR87_RS06555	0.10	-0.9
1,395,837	+		ABZR87_RS06555	0.10	-0.7
1,395,837	+		ABZR87_RS06555	0.10	+0.3
1,395,837	+		ABZR87_RS06555	0.10	-2.1
1,395,837	+		ABZR87_RS06555	0.10	-1.0
1,395,837	+		ABZR87_RS06555	0.10	+1.4
1,395,838	-		ABZR87_RS06555	0.10	+0.8
1,395,838	-		ABZR87_RS06555	0.10	+0.5
1,395,838	-		ABZR87_RS06555	0.10	-0.2
1,395,838	-		ABZR87_RS06555	0.10	+0.7
1,395,838	-		ABZR87_RS06555	0.10	+1.3
1,395,845	+		ABZR87_RS06555	0.11	+0.2
1,395,845	+		ABZR87_RS06555	0.11	-1.8
1,395,845	+		ABZR87_RS06555	0.11	+0.1
1,395,846	-		ABZR87_RS06555	0.11	+0.9
1,395,846	-		ABZR87_RS06555	0.11	-0.1
1,395,846	-		ABZR87_RS06555	0.11	-0.8
1,395,846	-		ABZR87_RS06555	0.11	+1.3
1,395,870	+		ABZR87_RS06555	0.12	-1.0
1,396,203	+		ABZR87_RS06555	0.35	-0.9
1,396,203	+		ABZR87_RS06555	0.35	-1.5
1,396,203	+		ABZR87_RS06555	0.35	-0.8
1,396,203	+		ABZR87_RS06555	0.35	-1.0
1,396,203	+		ABZR87_RS06555	0.35	-1.1
1,396,203	+		ABZR87_RS06555	0.35	+0.6
1,396,204	-		ABZR87_RS06555	0.35	+0.4
1,396,204	-		ABZR87_RS06555	0.35	-0.4
1,396,204	-		ABZR87_RS06555	0.35	+0.3
1,396,204	-		ABZR87_RS06555	0.35	+1.2
1,396,204	-		ABZR87_RS06555	0.35	+0.1
1,396,204	-		ABZR87_RS06555	0.35	+0.5
1,396,204	-		ABZR87_RS06555	0.35	-0.6
1,396,204	-		ABZR87_RS06555	0.35	-2.7
1,396,204	-		ABZR87_RS06555	0.35	-0.6
1,396,204	-		ABZR87_RS06555	0.35	-0.9
1,396,294	-		ABZR87_RS06555	0.42	-0.5
1,396,294	-		ABZR87_RS06555	0.42	-0.9
1,396,344	+		ABZR87_RS06555	0.45	-1.0
1,396,344	+		ABZR87_RS06555	0.45	+1.8
1,396,345	-		ABZR87_RS06555	0.45	-1.2
1,396,345	-		ABZR87_RS06555	0.45	+1.0