Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS06405

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
1,363,826	+				-1.3
1,363,826	+				-0.5
1,363,826	+				+1.1
1,363,826	+				-0.5
1,363,826	+				+0.8
1,363,826	+				-0.3
1,363,827	-				+0.4
1,363,827	-				+0.0
1,363,827	-				-0.2
1,363,827	-				+0.4
1,363,827	-				-0.8
1,363,827	-				+0.1
1,363,827	-				+1.1
1,363,827	-				+1.3
1,363,827	-				-0.8
1,363,827	-				-1.3
1,363,827	-				-0.6
1,363,827	-				-0.5
1,363,830	+				-0.4
1,363,830	+				-0.5
1,363,830	+				-0.6
1,363,830	+				-0.0
1,363,831	-				-0.7
1,363,831	-				+0.1
1,363,880	+				-0.2
1,363,881	-				+0.5
1,363,907	+				+3.8
1,363,907	+				+4.4
1,363,907	+				+3.6
1,363,907	+				+3.8
1,363,908	-				+3.8
1,363,908	-				+3.8
1,363,908	-				+3.6
1,363,908	-				+4.0
1,363,908	-				+3.6
1,363,910	+				+3.6
1,363,910	+				+4.0
1,363,910	+				+3.9
1,363,911	-				+4.0
1,363,911	-				+2.9
1,363,911	-				+4.0
1,363,911	-				+3.8
1,363,964	+		ABZR87_RS06400	0.13	+3.8
1,363,965	-		ABZR87_RS06400	0.14	+4.1
1,363,965	-		ABZR87_RS06400	0.14	+4.2
1,363,965	-		ABZR87_RS06400	0.14	+4.0
1,364,141	+		ABZR87_RS06400	0.41	+3.9
1,364,141	+		ABZR87_RS06400	0.41	+3.6
1,364,141	+		ABZR87_RS06400	0.41	+4.7
1,364,141	+		ABZR87_RS06400	0.41	+3.9
1,364,141	+		ABZR87_RS06400	0.41	+4.0
1,364,141	+		ABZR87_RS06400	0.41	+3.9
1,364,142	-		ABZR87_RS06400	0.42	+3.5
1,364,142	-		ABZR87_RS06400	0.42	+3.9
1,364,142	-		ABZR87_RS06400	0.42	+3.8
1,364,164	-		ABZR87_RS06400	0.45	+4.2
1,364,210	+		ABZR87_RS06400	0.52	+4.0
1,364,210	+		ABZR87_RS06400	0.52	+4.0
1,364,246	+		ABZR87_RS06400	0.58	+3.6
1,364,246	+		ABZR87_RS06400	0.58	+3.7
1,364,247	-		ABZR87_RS06400	0.58	+4.5
1,364,521	+				+4.0
1,364,521	+				+3.5
1,364,521	+				+3.5
1,364,522	-				-0.4
1,364,522	-				+0.5
1,364,522	-				+0.3
1,364,522	-				-1.3
1,364,522	-				-1.0
1,364,522	-				-2.2
1,364,576	-				-0.1
1,364,589	+				+0.7
1,364,717	+				-1.9
1,364,718	-				-0.3
1,364,718	-				+0.9
1,364,734	-				+1.4
1,364,812	-				+0.8
1,364,812	-				+0.1
1,364,818	+				-0.2
1,364,818	+				-0.2
1,364,818	+				+0.3
1,364,818	+				+0.1
1,364,818	+				-1.3
1,364,818	+				+0.3
1,364,819	-				-1.7
1,364,819	-				-1.2
1,364,819	-				-1.0
1,364,819	-				-1.0
1,364,819	-				-0.6
1,364,819	-				-0.5
1,364,879	+		ABZR87_RS06405	0.15	-0.9
1,365,187	+		ABZR87_RS06405	0.87	+0.1
1,365,327	+				+0.8
1,365,327	+				-0.2
1,365,327	+				+0.6
1,365,328	-				-0.2
1,365,328	-				+0.1
1,365,328	-				+0.3
1,365,328	-				-0.3
1,365,328	-				+0.0
1,365,328	-				-0.5
1,365,328	-				+1.1
1,365,328	-				+1.4
1,365,353	+				-0.0
1,365,362	+				+0.2
1,365,362	+				+0.2
1,365,362	+				-2.4
1,365,362	+				-0.9
1,365,363	-				-0.5
1,365,363	-				-0.2
1,365,363	-				+0.7
1,365,363	-				-0.9
1,365,372	+				-0.1
1,365,372	+				-0.3
1,365,372	+				+0.5
1,365,372	+				-0.2
1,365,373	-				-1.3
1,365,373	-				+0.4
1,365,373	-				-0.5
1,365,373	-				-1.3
1,365,377	+				-1.0
1,365,377	+				-0.0
1,365,378	-				+1.1
1,365,378	-				+1.3
1,365,378	-				-0.6
1,365,378	-				+1.4
1,365,436	-				+1.1
1,365,436	-				-0.2
1,365,464	+				+1.1
1,365,464	+				-0.4
1,365,465	-				-0.1
1,365,465	-				+0.4
1,365,586	+				+0.4
1,365,586	+				+0.3
1,365,586	+				-0.3
1,365,586	+				+1.0
1,365,586	+				-0.0
1,365,586	+				-0.2
1,365,587	-				+0.2
1,365,587	-				-1.4
1,365,587	-				+0.7
1,365,587	-				-0.0
1,365,587	-				+0.5
1,365,610	+				-0.4
1,365,610	+				-0.7
1,365,610	+				-0.5
1,365,610	+				+0.8
1,365,610	+				-0.8
1,365,610	+				-0.1
1,365,610	+				-1.3
1,365,611	-				+0.9
1,365,611	-				+1.0
1,365,611	-				-0.6
1,365,734	-				+0.2
1,365,760	+		ABZR87_RS06410	0.10	-0.1
1,365,760	+		ABZR87_RS06410	0.10	-0.3
1,365,760	+		ABZR87_RS06410	0.10	+0.1
1,365,761	-		ABZR87_RS06410	0.10	-2.3
1,365,761	-		ABZR87_RS06410	0.10	+2.8
1,365,808	+		ABZR87_RS06410	0.12	-0.1
1,365,808	+		ABZR87_RS06410	0.12	-0.6
1,365,809	-		ABZR87_RS06410	0.12	-0.6
1,365,828	+		ABZR87_RS06410	0.13	-0.3
1,365,901	+		ABZR87_RS06410	0.15	-0.2
1,365,902	-		ABZR87_RS06410	0.15	+0.5
1,365,979	+		ABZR87_RS06410	0.18	-0.7
1,365,979	+		ABZR87_RS06410	0.18	+0.4
1,365,980	-		ABZR87_RS06410	0.18	-0.2
1,366,123	+		ABZR87_RS06410	0.24	-0.7
1,366,152	-		ABZR87_RS06410	0.25	+1.4