Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05100

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
1,074,070	+		ABZR87_RS05095	0.73	+0.6
1,074,071	-		ABZR87_RS05095	0.73	-0.6
1,074,119	+		ABZR87_RS05095	0.77	+0.6
1,074,119	+		ABZR87_RS05095	0.77	-0.2
1,074,119	+		ABZR87_RS05095	0.77	+0.6
1,074,119	+		ABZR87_RS05095	0.77	+0.3
1,074,119	+		ABZR87_RS05095	0.77	+0.7
1,074,120	-		ABZR87_RS05095	0.77	-0.3
1,074,120	-		ABZR87_RS05095	0.77	+1.0
1,074,120	-		ABZR87_RS05095	0.77	-0.4
1,074,120	-		ABZR87_RS05095	0.77	-1.4
1,074,161	+		ABZR87_RS05095	0.81	-1.5
1,074,161	+		ABZR87_RS05095	0.81	+0.6
1,074,161	+		ABZR87_RS05095	0.81	+0.1
1,074,162	-		ABZR87_RS05095	0.81	+0.1
1,074,162	-		ABZR87_RS05095	0.81	+0.3
1,074,162	-		ABZR87_RS05095	0.81	+0.2
1,074,162	-		ABZR87_RS05095	0.81	-0.0
1,074,162	-		ABZR87_RS05095	0.81	-0.4
1,074,162	-		ABZR87_RS05095	0.81	+0.3
1,074,162	-		ABZR87_RS05095	0.81	+0.2
1,074,162	-		ABZR87_RS05095	0.81	+0.7
1,074,182	+		ABZR87_RS05095	0.83	-0.5
1,074,182	+		ABZR87_RS05095	0.83	+1.2
1,074,183	-		ABZR87_RS05095	0.83	-0.1
1,074,183	-		ABZR87_RS05095	0.83	-0.2
1,074,183	-		ABZR87_RS05095	0.83	+1.0
1,074,197	+		ABZR87_RS05095	0.84	+2.0
1,074,197	+		ABZR87_RS05095	0.84	+0.2
1,074,197	+		ABZR87_RS05095	0.84	+0.6
1,074,197	+		ABZR87_RS05095	0.84	-1.0
1,074,197	+		ABZR87_RS05095	0.84	-2.0
1,074,197	+		ABZR87_RS05095	0.84	-0.3
1,074,198	-		ABZR87_RS05095	0.84	-0.2
1,074,198	-		ABZR87_RS05095	0.84	-0.2
1,074,198	-		ABZR87_RS05095	0.84	+0.6
1,074,198	-		ABZR87_RS05095	0.84	+0.4
1,074,198	-		ABZR87_RS05095	0.84	+0.1
1,074,198	-		ABZR87_RS05095	0.84	-1.8
1,074,198	-		ABZR87_RS05095	0.84	-0.9
1,074,198	-		ABZR87_RS05095	0.84	+0.3
1,074,198	-		ABZR87_RS05095	0.84	+0.9
1,074,198	-		ABZR87_RS05095	0.84	-0.2
1,074,198	-		ABZR87_RS05095	0.84	+0.0
1,074,225	+		ABZR87_RS05095	0.87	-0.4
1,074,225	+		ABZR87_RS05095	0.87	-0.4
1,074,225	+		ABZR87_RS05095	0.87	-1.5
1,074,226	-		ABZR87_RS05095	0.87	+0.5
1,074,226	-		ABZR87_RS05095	0.87	-1.3
1,074,380	+				+0.4
1,074,380	+				-0.7
1,074,380	+				+0.8
1,074,380	+				-2.0
1,074,381	-				-0.5
1,074,381	-				-0.6
1,074,381	-				+1.1
1,074,456	+				-0.6
1,074,457	-				-0.5
1,074,465	+				+0.3
1,074,479	+				+0.7
1,074,479	+				+0.9
1,074,479	+				+1.0
1,074,480	-				+0.1
1,074,480	-				-0.4
1,074,484	+				+0.1
1,074,484	+				+0.0
1,074,484	+				-1.7
1,074,484	+				-0.4
1,074,485	-				-0.5
1,074,485	-				-0.4
1,074,485	-				-0.5
1,074,485	-				-0.3
1,074,485	-				-0.6
1,074,485	-				+0.3
1,074,485	-				+1.0
1,074,485	-				-0.3
1,074,494	+				+0.8
1,074,494	+				-0.8
1,074,494	+				+1.7
1,074,494	+				+0.4
1,074,494	+				-1.2
1,074,523	+				-0.3
1,074,524	-				+0.3
1,074,545	+				-0.1
1,074,545	+				+0.3
1,074,546	-				+0.1
1,074,766	+				-0.3
1,074,846	+		ABZR87_RS05100	0.14	+0.1
1,074,846	+		ABZR87_RS05100	0.14	+1.7
1,074,846	+		ABZR87_RS05100	0.14	-1.0
1,074,846	+		ABZR87_RS05100	0.14	-1.1
1,074,846	+		ABZR87_RS05100	0.14	-1.9
1,074,846	+		ABZR87_RS05100	0.14	-2.7
1,074,846	+		ABZR87_RS05100	0.14	-0.6
1,074,847	-		ABZR87_RS05100	0.14	-0.6
1,074,847	-		ABZR87_RS05100	0.14	-2.7
1,074,847	-		ABZR87_RS05100	0.14	-2.2
1,074,847	-		ABZR87_RS05100	0.14	-2.2
1,075,084	-		ABZR87_RS05100	0.70	-2.4
1,075,084	-		ABZR87_RS05100	0.70	-1.6
1,075,257	+				+0.9
1,075,602	+		ABZR87_RS05105	0.23	+0.1
1,075,602	+		ABZR87_RS05105	0.23	-0.0
1,075,656	+		ABZR87_RS05105	0.27	+0.5
1,075,659	-		ABZR87_RS05105	0.27	+0.4
1,075,659	-		ABZR87_RS05105	0.27	+0.3
1,075,991	+		ABZR87_RS05105	0.52	+0.6
1,075,992	-		ABZR87_RS05105	0.52	-0.3
1,075,992	-		ABZR87_RS05105	0.52	+0.5
1,075,992	-		ABZR87_RS05105	0.52	+0.4
1,075,992	-		ABZR87_RS05105	0.52	-0.2
1,075,992	-		ABZR87_RS05105	0.52	+0.2
1,076,196	+		ABZR87_RS05105	0.68	+0.7
1,076,196	+		ABZR87_RS05105	0.68	+0.2