Experiment: C.elegans, mixed culture-2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS04720 and ABZR87_RS04725 are separated by 42 nucleotides ABZR87_RS04725 and ABZR87_RS04730 are separated by 184 nucleotides ABZR87_RS04730 and ABZR87_RS04735 are separated by 109 nucleotides
ABZR87_RS04720: ABZR87_RS04720 - IclR family transcriptional regulator, at 984,594 to 985,391
_RS04720
ABZR87_RS04725: ABZR87_RS04725 - universal stress protein, at 985,434 to 985,868
_RS04725
ABZR87_RS04730: ABZR87_RS04730 - thioesterase family protein, at 986,053 to 986,496
_RS04730
ABZR87_RS04735: ABZR87_RS04735 - hypothetical protein, at 986,606 to 986,827
_RS04735
Position (kb) 985
986 Strain fitness (log2 ratio) -2
-1
0
1
2 at 984.465 kb on + strand at 984.465 kb on + strand at 984.465 kb on + strand at 984.465 kb on + strand at 984.465 kb on + strand at 984.465 kb on + strand at 984.465 kb on + strand at 984.466 kb on - strand at 984.466 kb on - strand at 984.466 kb on - strand at 984.466 kb on - strand at 984.466 kb on - strand at 984.466 kb on - strand at 984.466 kb on - strand at 984.466 kb on - strand at 984.495 kb on + strand at 984.510 kb on + strand at 984.510 kb on + strand at 984.511 kb on - strand at 984.515 kb on - strand at 984.528 kb on - strand at 984.536 kb on + strand at 984.536 kb on + strand at 984.536 kb on + strand at 984.537 kb on - strand at 984.538 kb on + strand at 984.538 kb on + strand at 984.539 kb on - strand at 984.762 kb on + strand, within ABZR87_RS04720 at 984.762 kb on + strand, within ABZR87_RS04720 at 984.762 kb on + strand, within ABZR87_RS04720 at 984.763 kb on - strand, within ABZR87_RS04720 at 984.763 kb on - strand, within ABZR87_RS04720 at 984.763 kb on - strand, within ABZR87_RS04720 at 984.763 kb on - strand, within ABZR87_RS04720 at 984.784 kb on - strand, within ABZR87_RS04720 at 984.852 kb on + strand, within ABZR87_RS04720 at 984.852 kb on + strand, within ABZR87_RS04720 at 984.852 kb on + strand, within ABZR87_RS04720 at 984.852 kb on + strand, within ABZR87_RS04720 at 984.853 kb on - strand, within ABZR87_RS04720 at 984.853 kb on - strand, within ABZR87_RS04720 at 984.853 kb on - strand, within ABZR87_RS04720 at 984.853 kb on - strand, within ABZR87_RS04720 at 984.963 kb on + strand, within ABZR87_RS04720 at 984.963 kb on + strand, within ABZR87_RS04720 at 984.963 kb on + strand, within ABZR87_RS04720 at 984.963 kb on + strand, within ABZR87_RS04720 at 984.963 kb on + strand, within ABZR87_RS04720 at 984.964 kb on - strand, within ABZR87_RS04720 at 984.964 kb on - strand, within ABZR87_RS04720 at 984.964 kb on - strand, within ABZR87_RS04720 at 984.964 kb on - strand, within ABZR87_RS04720 at 984.964 kb on - strand, within ABZR87_RS04720 at 984.964 kb on - strand, within ABZR87_RS04720 at 985.032 kb on + strand, within ABZR87_RS04720 at 985.032 kb on + strand, within ABZR87_RS04720 at 985.032 kb on + strand, within ABZR87_RS04720 at 985.032 kb on + strand, within ABZR87_RS04720 at 985.032 kb on + strand, within ABZR87_RS04720 at 985.032 kb on + strand, within ABZR87_RS04720 at 985.032 kb on + strand, within ABZR87_RS04720 at 985.033 kb on - strand, within ABZR87_RS04720 at 985.033 kb on - strand, within ABZR87_RS04720 at 985.033 kb on - strand, within ABZR87_RS04720 at 985.033 kb on - strand, within ABZR87_RS04720 at 985.033 kb on - strand, within ABZR87_RS04720 at 985.033 kb on - strand, within ABZR87_RS04720 at 985.056 kb on + strand, within ABZR87_RS04720 at 985.056 kb on + strand, within ABZR87_RS04720 at 985.056 kb on + strand, within ABZR87_RS04720 at 985.056 kb on + strand, within ABZR87_RS04720 at 985.056 kb on + strand, within ABZR87_RS04720 at 985.056 kb on + strand, within ABZR87_RS04720 at 985.057 kb on - strand, within ABZR87_RS04720 at 985.057 kb on - strand, within ABZR87_RS04720 at 985.057 kb on - strand, within ABZR87_RS04720 at 985.057 kb on - strand, within ABZR87_RS04720 at 985.057 kb on - strand, within ABZR87_RS04720 at 985.057 kb on - strand, within ABZR87_RS04720 at 985.188 kb on + strand, within ABZR87_RS04720 at 985.189 kb on - strand, within ABZR87_RS04720 at 985.250 kb on + strand, within ABZR87_RS04720 at 985.251 kb on - strand, within ABZR87_RS04720 at 985.251 kb on - strand, within ABZR87_RS04720 at 985.251 kb on - strand, within ABZR87_RS04720 at 985.693 kb on + strand, within ABZR87_RS04725 at 985.694 kb on - strand, within ABZR87_RS04725 at 985.715 kb on + strand, within ABZR87_RS04725 at 985.831 kb on + strand at 985.832 kb on - strand at 985.854 kb on + strand at 985.855 kb on - strand at 985.855 kb on - strand at 985.855 kb on - strand at 985.855 kb on - strand at 985.929 kb on + strand at 985.930 kb on - strand at 985.930 kb on - strand at 985.956 kb on + strand at 985.957 kb on - strand at 985.968 kb on + strand at 985.968 kb on + strand at 985.968 kb on + strand at 985.968 kb on + strand at 985.968 kb on + strand at 985.969 kb on - strand at 985.969 kb on - strand at 985.969 kb on - strand at 985.969 kb on - strand at 985.969 kb on - strand at 985.969 kb on - strand at 985.969 kb on - strand at 986.161 kb on + strand, within ABZR87_RS04730 at 986.161 kb on + strand, within ABZR87_RS04730 at 986.161 kb on + strand, within ABZR87_RS04730 at 986.161 kb on + strand, within ABZR87_RS04730 at 986.162 kb on - strand, within ABZR87_RS04730 at 986.162 kb on - strand, within ABZR87_RS04730 at 986.387 kb on + strand, within ABZR87_RS04730 at 986.387 kb on + strand, within ABZR87_RS04730 at 986.430 kb on + strand, within ABZR87_RS04730 at 986.430 kb on + strand, within ABZR87_RS04730 at 986.431 kb on - strand, within ABZR87_RS04730 at 986.506 kb on + strand at 986.507 kb on - strand at 986.507 kb on - strand at 986.507 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction C.elegans, mixed culture-2 remove 984,465 + -0.7 984,465 + -0.1 984,465 + -1.4 984,465 + +0.1 984,465 + -0.7 984,465 + -0.7 984,465 + +0.7 984,466 - -0.5 984,466 - -0.2 984,466 - +0.6 984,466 - -0.6 984,466 - +0.7 984,466 - +0.6 984,466 - -0.1 984,466 - -1.5 984,495 + +0.5 984,510 + -2.7 984,510 + +1.1 984,511 - +0.4 984,515 - +0.6 984,528 - +0.3 984,536 + +1.0 984,536 + -0.6 984,536 + +0.3 984,537 - +0.1 984,538 + +0.6 984,538 + +0.1 984,539 - +0.3 984,762 + ABZR87_RS04720 0.21 +0.8 984,762 + ABZR87_RS04720 0.21 -0.0 984,762 + ABZR87_RS04720 0.21 -1.0 984,763 - ABZR87_RS04720 0.21 +0.6 984,763 - ABZR87_RS04720 0.21 +0.0 984,763 - ABZR87_RS04720 0.21 +0.2 984,763 - ABZR87_RS04720 0.21 -0.0 984,784 - ABZR87_RS04720 0.24 +0.1 984,852 + ABZR87_RS04720 0.32 -0.5 984,852 + ABZR87_RS04720 0.32 -0.7 984,852 + ABZR87_RS04720 0.32 +0.3 984,852 + ABZR87_RS04720 0.32 +0.7 984,853 - ABZR87_RS04720 0.32 +0.6 984,853 - ABZR87_RS04720 0.32 +0.5 984,853 - ABZR87_RS04720 0.32 +0.1 984,853 - ABZR87_RS04720 0.32 -0.6 984,963 + ABZR87_RS04720 0.46 +0.9 984,963 + ABZR87_RS04720 0.46 -0.2 984,963 + ABZR87_RS04720 0.46 -0.3 984,963 + ABZR87_RS04720 0.46 -0.0 984,963 + ABZR87_RS04720 0.46 +0.3 984,964 - ABZR87_RS04720 0.46 +0.5 984,964 - ABZR87_RS04720 0.46 +0.2 984,964 - ABZR87_RS04720 0.46 +0.1 984,964 - ABZR87_RS04720 0.46 +0.6 984,964 - ABZR87_RS04720 0.46 -1.5 984,964 - ABZR87_RS04720 0.46 +0.5 985,032 + ABZR87_RS04720 0.55 -0.5 985,032 + ABZR87_RS04720 0.55 +0.3 985,032 + ABZR87_RS04720 0.55 +0.1 985,032 + ABZR87_RS04720 0.55 +0.2 985,032 + ABZR87_RS04720 0.55 -0.4 985,032 + ABZR87_RS04720 0.55 -0.1 985,032 + ABZR87_RS04720 0.55 -1.3 985,033 - ABZR87_RS04720 0.55 +2.0 985,033 - ABZR87_RS04720 0.55 -1.3 985,033 - ABZR87_RS04720 0.55 +0.6 985,033 - ABZR87_RS04720 0.55 -2.7 985,033 - ABZR87_RS04720 0.55 +1.5 985,033 - ABZR87_RS04720 0.55 +0.4 985,056 + ABZR87_RS04720 0.58 +0.4 985,056 + ABZR87_RS04720 0.58 -0.6 985,056 + ABZR87_RS04720 0.58 -0.4 985,056 + ABZR87_RS04720 0.58 -0.8 985,056 + ABZR87_RS04720 0.58 -0.8 985,056 + ABZR87_RS04720 0.58 -1.3 985,057 - ABZR87_RS04720 0.58 -0.4 985,057 - ABZR87_RS04720 0.58 +0.1 985,057 - ABZR87_RS04720 0.58 -1.1 985,057 - ABZR87_RS04720 0.58 -0.6 985,057 - ABZR87_RS04720 0.58 -0.1 985,057 - ABZR87_RS04720 0.58 +0.2 985,188 + ABZR87_RS04720 0.74 -0.0 985,189 - ABZR87_RS04720 0.75 -0.8 985,250 + ABZR87_RS04720 0.82 -0.2 985,251 - ABZR87_RS04720 0.82 -0.8 985,251 - ABZR87_RS04720 0.82 -0.3 985,251 - ABZR87_RS04720 0.82 +0.0 985,693 + ABZR87_RS04725 0.60 +0.1 985,694 - ABZR87_RS04725 0.60 -1.3 985,715 + ABZR87_RS04725 0.65 -1.8 985,831 + +0.2 985,832 - -0.2 985,854 + +0.2 985,855 - +0.0 985,855 - +0.4 985,855 - -0.1 985,855 - -1.3 985,929 + +0.9 985,930 - -0.3 985,930 - -0.9 985,956 + -0.3 985,957 - -0.3 985,968 + -0.6 985,968 + +0.7 985,968 + +0.0 985,968 + -0.0 985,968 + +0.8 985,969 - -0.4 985,969 - -0.1 985,969 - -1.0 985,969 - +0.7 985,969 - +0.1 985,969 - -0.9 985,969 - -0.1 986,161 + ABZR87_RS04730 0.24 -0.0 986,161 + ABZR87_RS04730 0.24 +0.1 986,161 + ABZR87_RS04730 0.24 -0.5 986,161 + ABZR87_RS04730 0.24 -0.4 986,162 - ABZR87_RS04730 0.25 -0.9 986,162 - ABZR87_RS04730 0.25 -0.4 986,387 + ABZR87_RS04730 0.75 -0.0 986,387 + ABZR87_RS04730 0.75 -0.2 986,430 + ABZR87_RS04730 0.85 -0.4 986,430 + ABZR87_RS04730 0.85 -0.4 986,431 - ABZR87_RS04730 0.85 +1.1 986,506 + -0.1 986,507 - +0.9 986,507 - +0.1 986,507 - +0.8
Or see this region's nucleotide sequence