Experiment: C.elegans, mixed culture-2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS03845 and ABZR87_RS03850 are separated by 94 nucleotides ABZR87_RS03850 and ABZR87_RS03855 overlap by 4 nucleotides ABZR87_RS03855 and ABZR87_RS03860 are separated by 343 nucleotides
ABZR87_RS03845: ABZR87_RS03845 - M20/M25/M40 family metallo-hydrolase, at 793,703 to 794,977
_RS03845
ABZR87_RS03850: ABZR87_RS03850 - ureidoglycolate lyase, at 795,072 to 795,599
_RS03850
ABZR87_RS03855: ABZR87_RS03855 - allantoicase, at 795,596 to 796,606
_RS03855
ABZR87_RS03860: ABZR87_RS03860 - C4-dicarboxylate transporter DctA, at 796,950 to 798,290
_RS03860
Position (kb) 795
796
797 Strain fitness (log2 ratio) -2
-1
0
1 at 794.628 kb on + strand, within ABZR87_RS03845 at 795.073 kb on + strand at 795.073 kb on + strand at 795.073 kb on + strand at 795.073 kb on + strand at 795.073 kb on + strand at 795.074 kb on - strand at 795.074 kb on - strand at 795.074 kb on - strand at 795.074 kb on - strand at 795.074 kb on - strand at 795.074 kb on - strand at 795.226 kb on + strand, within ABZR87_RS03850 at 795.226 kb on + strand, within ABZR87_RS03850 at 795.226 kb on + strand, within ABZR87_RS03850 at 795.227 kb on - strand, within ABZR87_RS03850 at 795.310 kb on + strand, within ABZR87_RS03850 at 795.310 kb on + strand, within ABZR87_RS03850 at 795.310 kb on + strand, within ABZR87_RS03850 at 795.699 kb on + strand, within ABZR87_RS03855 at 795.699 kb on + strand, within ABZR87_RS03855 at 795.699 kb on + strand, within ABZR87_RS03855 at 795.699 kb on + strand, within ABZR87_RS03855 at 795.700 kb on - strand, within ABZR87_RS03855 at 795.700 kb on - strand, within ABZR87_RS03855 at 795.700 kb on - strand, within ABZR87_RS03855 at 795.700 kb on - strand, within ABZR87_RS03855 at 795.700 kb on - strand, within ABZR87_RS03855 at 795.700 kb on - strand, within ABZR87_RS03855 at 795.700 kb on - strand, within ABZR87_RS03855 at 795.700 kb on - strand, within ABZR87_RS03855 at 795.702 kb on + strand, within ABZR87_RS03855 at 795.702 kb on + strand, within ABZR87_RS03855 at 795.702 kb on + strand, within ABZR87_RS03855 at 795.702 kb on + strand, within ABZR87_RS03855 at 795.702 kb on + strand, within ABZR87_RS03855 at 795.703 kb on - strand, within ABZR87_RS03855 at 795.703 kb on - strand, within ABZR87_RS03855 at 795.703 kb on - strand, within ABZR87_RS03855 at 796.023 kb on + strand, within ABZR87_RS03855 at 796.023 kb on + strand, within ABZR87_RS03855 at 796.023 kb on + strand, within ABZR87_RS03855 at 796.023 kb on + strand, within ABZR87_RS03855 at 796.023 kb on + strand, within ABZR87_RS03855 at 796.024 kb on - strand, within ABZR87_RS03855 at 796.024 kb on - strand, within ABZR87_RS03855 at 796.024 kb on - strand, within ABZR87_RS03855 at 796.024 kb on - strand, within ABZR87_RS03855 at 796.024 kb on - strand, within ABZR87_RS03855 at 796.024 kb on - strand, within ABZR87_RS03855 at 796.024 kb on - strand, within ABZR87_RS03855 at 796.024 kb on - strand, within ABZR87_RS03855 at 796.101 kb on + strand, within ABZR87_RS03855 at 796.101 kb on + strand, within ABZR87_RS03855 at 796.102 kb on - strand, within ABZR87_RS03855 at 796.185 kb on + strand, within ABZR87_RS03855 at 796.185 kb on + strand, within ABZR87_RS03855 at 796.185 kb on + strand, within ABZR87_RS03855 at 796.185 kb on + strand, within ABZR87_RS03855 at 796.186 kb on - strand, within ABZR87_RS03855 at 796.186 kb on - strand, within ABZR87_RS03855 at 796.186 kb on - strand, within ABZR87_RS03855 at 796.186 kb on - strand, within ABZR87_RS03855 at 796.186 kb on - strand, within ABZR87_RS03855 at 796.269 kb on + strand, within ABZR87_RS03855 at 796.269 kb on + strand, within ABZR87_RS03855 at 796.270 kb on - strand, within ABZR87_RS03855 at 796.270 kb on - strand, within ABZR87_RS03855 at 796.380 kb on + strand, within ABZR87_RS03855 at 796.381 kb on - strand, within ABZR87_RS03855 at 796.381 kb on - strand, within ABZR87_RS03855 at 796.440 kb on + strand, within ABZR87_RS03855 at 796.440 kb on + strand, within ABZR87_RS03855 at 796.440 kb on + strand, within ABZR87_RS03855 at 796.440 kb on + strand, within ABZR87_RS03855 at 796.441 kb on - strand, within ABZR87_RS03855 at 796.441 kb on - strand, within ABZR87_RS03855 at 796.594 kb on + strand at 796.594 kb on + strand at 796.594 kb on + strand at 796.595 kb on - strand at 796.638 kb on + strand at 796.638 kb on + strand at 796.638 kb on + strand at 796.638 kb on + strand at 796.638 kb on + strand at 796.639 kb on - strand at 796.639 kb on - strand at 796.639 kb on - strand at 796.639 kb on - strand at 796.639 kb on - strand at 796.639 kb on - strand at 796.640 kb on + strand at 796.640 kb on + strand at 796.640 kb on + strand at 796.640 kb on + strand at 796.640 kb on + strand at 796.640 kb on + strand at 796.640 kb on + strand at 796.641 kb on - strand at 796.641 kb on - strand at 796.641 kb on - strand at 796.641 kb on - strand at 796.641 kb on - strand at 796.641 kb on - strand at 796.641 kb on - strand at 796.641 kb on - strand at 796.641 kb on - strand at 796.641 kb on - strand at 796.641 kb on - strand at 796.641 kb on - strand at 796.717 kb on + strand at 796.717 kb on + strand at 796.717 kb on + strand at 796.717 kb on + strand at 796.717 kb on + strand at 796.763 kb on + strand at 796.805 kb on + strand at 796.806 kb on - strand at 796.806 kb on - strand at 796.929 kb on + strand at 796.929 kb on + strand at 796.930 kb on - strand at 796.930 kb on - strand at 796.961 kb on + strand at 796.962 kb on - strand at 797.184 kb on + strand, within ABZR87_RS03860 at 797.185 kb on - strand, within ABZR87_RS03860 at 797.185 kb on - strand, within ABZR87_RS03860 at 797.185 kb on - strand, within ABZR87_RS03860 at 797.235 kb on + strand, within ABZR87_RS03860 at 797.235 kb on + strand, within ABZR87_RS03860 at 797.235 kb on + strand, within ABZR87_RS03860 at 797.235 kb on + strand, within ABZR87_RS03860 at 797.235 kb on + strand, within ABZR87_RS03860 at 797.235 kb on + strand, within ABZR87_RS03860 at 797.236 kb on - strand, within ABZR87_RS03860 at 797.236 kb on - strand, within ABZR87_RS03860 at 797.236 kb on - strand, within ABZR87_RS03860 at 797.236 kb on - strand, within ABZR87_RS03860 at 797.236 kb on - strand, within ABZR87_RS03860 at 797.304 kb on + strand, within ABZR87_RS03860 at 797.304 kb on + strand, within ABZR87_RS03860 at 797.304 kb on + strand, within ABZR87_RS03860 at 797.304 kb on + strand, within ABZR87_RS03860 at 797.304 kb on + strand, within ABZR87_RS03860 at 797.305 kb on - strand, within ABZR87_RS03860 at 797.305 kb on - strand, within ABZR87_RS03860 at 797.305 kb on - strand, within ABZR87_RS03860 at 797.305 kb on - strand, within ABZR87_RS03860 at 797.305 kb on - strand, within ABZR87_RS03860 at 797.372 kb on + strand, within ABZR87_RS03860 at 797.373 kb on - strand, within ABZR87_RS03860 at 797.373 kb on - strand, within ABZR87_RS03860 at 797.373 kb on - strand, within ABZR87_RS03860 at 797.586 kb on + strand, within ABZR87_RS03860 at 797.587 kb on - strand, within ABZR87_RS03860
Per-strain Table
Position Strand Gene LocusTag Fraction C.elegans, mixed culture-2 remove 794,628 + ABZR87_RS03845 0.73 -0.8 795,073 + +0.3 795,073 + +0.1 795,073 + -1.3 795,073 + +0.1 795,073 + +0.1 795,074 - -0.3 795,074 - -2.6 795,074 - +1.6 795,074 - +0.6 795,074 - +0.2 795,074 - +0.6 795,226 + ABZR87_RS03850 0.29 -0.4 795,226 + ABZR87_RS03850 0.29 -1.6 795,226 + ABZR87_RS03850 0.29 -1.8 795,227 - ABZR87_RS03850 0.29 -0.0 795,310 + ABZR87_RS03850 0.45 -0.9 795,310 + ABZR87_RS03850 0.45 -0.5 795,310 + ABZR87_RS03850 0.45 -0.4 795,699 + ABZR87_RS03855 0.10 -1.0 795,699 + ABZR87_RS03855 0.10 -0.8 795,699 + ABZR87_RS03855 0.10 -0.7 795,699 + ABZR87_RS03855 0.10 -1.6 795,700 - ABZR87_RS03855 0.10 -0.6 795,700 - ABZR87_RS03855 0.10 +0.4 795,700 - ABZR87_RS03855 0.10 -1.1 795,700 - ABZR87_RS03855 0.10 -0.3 795,700 - ABZR87_RS03855 0.10 -0.0 795,700 - ABZR87_RS03855 0.10 -1.2 795,700 - ABZR87_RS03855 0.10 -0.8 795,700 - ABZR87_RS03855 0.10 -0.5 795,702 + ABZR87_RS03855 0.10 +0.2 795,702 + ABZR87_RS03855 0.10 -0.0 795,702 + ABZR87_RS03855 0.10 -0.8 795,702 + ABZR87_RS03855 0.10 -0.9 795,702 + ABZR87_RS03855 0.10 +0.1 795,703 - ABZR87_RS03855 0.11 +0.1 795,703 - ABZR87_RS03855 0.11 -0.1 795,703 - ABZR87_RS03855 0.11 +0.4 796,023 + ABZR87_RS03855 0.42 -1.0 796,023 + ABZR87_RS03855 0.42 -0.4 796,023 + ABZR87_RS03855 0.42 +0.7 796,023 + ABZR87_RS03855 0.42 +0.1 796,023 + ABZR87_RS03855 0.42 +0.2 796,024 - ABZR87_RS03855 0.42 +0.2 796,024 - ABZR87_RS03855 0.42 -0.2 796,024 - ABZR87_RS03855 0.42 -0.2 796,024 - ABZR87_RS03855 0.42 -0.6 796,024 - ABZR87_RS03855 0.42 -0.4 796,024 - ABZR87_RS03855 0.42 -0.9 796,024 - ABZR87_RS03855 0.42 +0.2 796,024 - ABZR87_RS03855 0.42 +0.4 796,101 + ABZR87_RS03855 0.50 -0.7 796,101 + ABZR87_RS03855 0.50 -1.0 796,102 - ABZR87_RS03855 0.50 +0.3 796,185 + ABZR87_RS03855 0.58 -0.6 796,185 + ABZR87_RS03855 0.58 -0.9 796,185 + ABZR87_RS03855 0.58 -0.6 796,185 + ABZR87_RS03855 0.58 -0.2 796,186 - ABZR87_RS03855 0.58 +0.7 796,186 - ABZR87_RS03855 0.58 +0.1 796,186 - ABZR87_RS03855 0.58 -0.4 796,186 - ABZR87_RS03855 0.58 +0.4 796,186 - ABZR87_RS03855 0.58 -1.7 796,269 + ABZR87_RS03855 0.67 -1.9 796,269 + ABZR87_RS03855 0.67 -1.5 796,270 - ABZR87_RS03855 0.67 +0.1 796,270 - ABZR87_RS03855 0.67 -0.7 796,380 + ABZR87_RS03855 0.78 -1.8 796,381 - ABZR87_RS03855 0.78 -1.0 796,381 - ABZR87_RS03855 0.78 -0.5 796,440 + ABZR87_RS03855 0.83 -0.8 796,440 + ABZR87_RS03855 0.83 +0.3 796,440 + ABZR87_RS03855 0.83 -0.6 796,440 + ABZR87_RS03855 0.83 +0.1 796,441 - ABZR87_RS03855 0.84 +1.0 796,441 - ABZR87_RS03855 0.84 +0.3 796,594 + +0.0 796,594 + -0.6 796,594 + -0.5 796,595 - -0.1 796,638 + +0.9 796,638 + +0.1 796,638 + -0.3 796,638 + -0.6 796,638 + -0.1 796,639 - -0.9 796,639 - +1.0 796,639 - -0.1 796,639 - -0.2 796,639 - -0.6 796,639 - +0.2 796,640 + -1.0 796,640 + -0.3 796,640 + -0.4 796,640 + +0.2 796,640 + -0.9 796,640 + -0.2 796,640 + -0.2 796,641 - -0.5 796,641 - +0.7 796,641 - -1.3 796,641 - +0.4 796,641 - +0.7 796,641 - -0.3 796,641 - +0.4 796,641 - +0.3 796,641 - +0.7 796,641 - -2.2 796,641 - +0.2 796,641 - +0.9 796,717 + -0.1 796,717 + -0.4 796,717 + +1.1 796,717 + +0.3 796,717 + -0.1 796,763 + +0.9 796,805 + -0.9 796,806 - +1.7 796,806 - -0.6 796,929 + -1.4 796,929 + -0.9 796,930 - -0.7 796,930 - +0.9 796,961 + -1.2 796,962 - +0.1 797,184 + ABZR87_RS03860 0.17 +0.4 797,185 - ABZR87_RS03860 0.18 -0.5 797,185 - ABZR87_RS03860 0.18 -0.0 797,185 - ABZR87_RS03860 0.18 -0.9 797,235 + ABZR87_RS03860 0.21 +0.0 797,235 + ABZR87_RS03860 0.21 -0.3 797,235 + ABZR87_RS03860 0.21 -2.0 797,235 + ABZR87_RS03860 0.21 +0.9 797,235 + ABZR87_RS03860 0.21 +0.7 797,235 + ABZR87_RS03860 0.21 +1.2 797,236 - ABZR87_RS03860 0.21 -0.1 797,236 - ABZR87_RS03860 0.21 -0.3 797,236 - ABZR87_RS03860 0.21 +0.6 797,236 - ABZR87_RS03860 0.21 -0.1 797,236 - ABZR87_RS03860 0.21 +0.3 797,304 + ABZR87_RS03860 0.26 -1.9 797,304 + ABZR87_RS03860 0.26 -0.9 797,304 + ABZR87_RS03860 0.26 -0.3 797,304 + ABZR87_RS03860 0.26 +0.2 797,304 + ABZR87_RS03860 0.26 +0.7 797,305 - ABZR87_RS03860 0.26 +0.8 797,305 - ABZR87_RS03860 0.26 +0.1 797,305 - ABZR87_RS03860 0.26 -0.0 797,305 - ABZR87_RS03860 0.26 +0.5 797,305 - ABZR87_RS03860 0.26 -0.7 797,372 + ABZR87_RS03860 0.31 -1.0 797,373 - ABZR87_RS03860 0.32 +0.5 797,373 - ABZR87_RS03860 0.32 -0.1 797,373 - ABZR87_RS03860 0.32 +0.4 797,586 + ABZR87_RS03860 0.47 +1.1 797,587 - ABZR87_RS03860 0.48 +0.5
Or see this region's nucleotide sequence