Experiment: C.elegans, mixed culture-2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS03590 and ABZR87_RS03595 are separated by 160 nucleotides ABZR87_RS03595 and ABZR87_RS03600 are separated by 107 nucleotides
ABZR87_RS03590: ABZR87_RS03590 - SDR family oxidoreductase, at 754,625 to 755,374
_RS03590
ABZR87_RS03595: ABZR87_RS03595 - hypothetical protein, at 755,535 to 755,786
_RS03595
ABZR87_RS03600: ABZR87_RS03600 - chaperonin GroEL, at 755,894 to 757,516
_RS03600
Position (kb) 755
756 Strain fitness (log2 ratio) -2
-1
0
1 at 754.838 kb on + strand, within ABZR87_RS03590 at 754.838 kb on + strand, within ABZR87_RS03590 at 754.839 kb on - strand, within ABZR87_RS03590 at 754.839 kb on - strand, within ABZR87_RS03590 at 754.839 kb on - strand, within ABZR87_RS03590 at 755.075 kb on + strand, within ABZR87_RS03590 at 755.076 kb on - strand, within ABZR87_RS03590 at 755.221 kb on - strand, within ABZR87_RS03590 at 755.326 kb on + strand at 755.326 kb on + strand at 755.326 kb on + strand at 755.326 kb on + strand at 755.536 kb on + strand at 755.536 kb on + strand at 755.536 kb on + strand at 755.536 kb on + strand at 755.778 kb on + strand at 755.778 kb on + strand at 755.778 kb on + strand at 755.778 kb on + strand at 755.778 kb on + strand at 755.779 kb on - strand at 755.779 kb on - strand at 755.779 kb on - strand at 755.779 kb on - strand at 755.898 kb on + strand at 755.898 kb on + strand at 755.898 kb on + strand at 755.898 kb on + strand at 755.898 kb on + strand at 755.899 kb on - strand at 755.899 kb on - strand at 755.899 kb on - strand at 755.899 kb on - strand at 756.014 kb on - strand at 756.084 kb on + strand, within ABZR87_RS03600 at 756.084 kb on + strand, within ABZR87_RS03600 at 756.085 kb on - strand, within ABZR87_RS03600 at 756.085 kb on - strand, within ABZR87_RS03600 at 756.085 kb on - strand, within ABZR87_RS03600 at 756.085 kb on - strand, within ABZR87_RS03600 at 756.090 kb on + strand, within ABZR87_RS03600 at 756.090 kb on + strand, within ABZR87_RS03600 at 756.090 kb on + strand, within ABZR87_RS03600 at 756.090 kb on + strand, within ABZR87_RS03600 at 756.090 kb on + strand, within ABZR87_RS03600 at 756.090 kb on + strand, within ABZR87_RS03600 at 756.090 kb on + strand, within ABZR87_RS03600 at 756.090 kb on + strand, within ABZR87_RS03600 at 756.090 kb on + strand, within ABZR87_RS03600 at 756.090 kb on + strand, within ABZR87_RS03600 at 756.090 kb on + strand, within ABZR87_RS03600 at 756.090 kb on + strand, within ABZR87_RS03600 at 756.090 kb on + strand, within ABZR87_RS03600 at 756.090 kb on + strand, within ABZR87_RS03600 at 756.091 kb on - strand, within ABZR87_RS03600 at 756.091 kb on - strand, within ABZR87_RS03600 at 756.091 kb on - strand, within ABZR87_RS03600 at 756.091 kb on - strand, within ABZR87_RS03600 at 756.091 kb on - strand, within ABZR87_RS03600 at 756.091 kb on - strand, within ABZR87_RS03600 at 756.091 kb on - strand, within ABZR87_RS03600 at 756.091 kb on - strand, within ABZR87_RS03600 at 756.091 kb on - strand, within ABZR87_RS03600 at 756.091 kb on - strand, within ABZR87_RS03600 at 756.438 kb on + strand, within ABZR87_RS03600 at 756.438 kb on + strand, within ABZR87_RS03600 at 756.439 kb on - strand, within ABZR87_RS03600
Per-strain Table
Position Strand Gene LocusTag Fraction C.elegans, mixed culture-2 remove 754,838 + ABZR87_RS03590 0.28 -1.2 754,838 + ABZR87_RS03590 0.28 +0.6 754,839 - ABZR87_RS03590 0.29 +1.7 754,839 - ABZR87_RS03590 0.29 -0.7 754,839 - ABZR87_RS03590 0.29 +0.4 755,075 + ABZR87_RS03590 0.60 -0.0 755,076 - ABZR87_RS03590 0.60 +0.2 755,221 - ABZR87_RS03590 0.79 -0.8 755,326 + +0.8 755,326 + -0.3 755,326 + +0.6 755,326 + +0.9 755,536 + -0.2 755,536 + -0.2 755,536 + -0.5 755,536 + -0.2 755,778 + +0.3 755,778 + +0.5 755,778 + +0.0 755,778 + -0.3 755,778 + +0.4 755,779 - +0.2 755,779 - -0.4 755,779 - -0.1 755,779 - -0.2 755,898 + +0.5 755,898 + +0.7 755,898 + -0.0 755,898 + -0.3 755,898 + -1.0 755,899 - -1.3 755,899 - -0.5 755,899 - +0.2 755,899 - +0.5 756,014 - -0.8 756,084 + ABZR87_RS03600 0.12 -0.3 756,084 + ABZR87_RS03600 0.12 -0.2 756,085 - ABZR87_RS03600 0.12 +0.0 756,085 - ABZR87_RS03600 0.12 -0.8 756,085 - ABZR87_RS03600 0.12 -0.2 756,085 - ABZR87_RS03600 0.12 +0.2 756,090 + ABZR87_RS03600 0.12 -0.5 756,090 + ABZR87_RS03600 0.12 +0.2 756,090 + ABZR87_RS03600 0.12 -1.5 756,090 + ABZR87_RS03600 0.12 -1.8 756,090 + ABZR87_RS03600 0.12 +0.7 756,090 + ABZR87_RS03600 0.12 -1.0 756,090 + ABZR87_RS03600 0.12 +0.7 756,090 + ABZR87_RS03600 0.12 -0.9 756,090 + ABZR87_RS03600 0.12 +0.3 756,090 + ABZR87_RS03600 0.12 +0.9 756,090 + ABZR87_RS03600 0.12 -0.0 756,090 + ABZR87_RS03600 0.12 -0.2 756,090 + ABZR87_RS03600 0.12 +0.7 756,090 + ABZR87_RS03600 0.12 -1.1 756,091 - ABZR87_RS03600 0.12 -0.4 756,091 - ABZR87_RS03600 0.12 +0.1 756,091 - ABZR87_RS03600 0.12 +0.5 756,091 - ABZR87_RS03600 0.12 +0.7 756,091 - ABZR87_RS03600 0.12 +0.7 756,091 - ABZR87_RS03600 0.12 +0.2 756,091 - ABZR87_RS03600 0.12 -0.3 756,091 - ABZR87_RS03600 0.12 +0.8 756,091 - ABZR87_RS03600 0.12 +1.1 756,091 - ABZR87_RS03600 0.12 -0.6 756,438 + ABZR87_RS03600 0.34 -0.5 756,438 + ABZR87_RS03600 0.34 +0.1 756,439 - ABZR87_RS03600 0.34 -0.0
Or see this region's nucleotide sequence