Experiment: C.elegans, mixed culture-2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS03315 and ABZR87_RS03320 are separated by 24 nucleotides ABZR87_RS03320 and ABZR87_RS03325 are separated by 398 nucleotides ABZR87_RS03325 and ABZR87_RS03330 are separated by 30 nucleotides ABZR87_RS03330 and ABZR87_RS03335 are separated by 102 nucleotides ABZR87_RS03335 and ABZR87_RS03340 are separated by 12 nucleotides
ABZR87_RS03315: ABZR87_RS03315 - glutathione-regulated potassium-efflux system protein KefC, at 699,107 to 701,047
_RS03315
ABZR87_RS03320: ABZR87_RS03320 - NAD(P)H-dependent oxidoreductase, at 701,072 to 701,623
_RS03320
ABZR87_RS03325: ABZR87_RS03325 - GNAT family N-acetyltransferase, at 702,022 to 702,717
_RS03325
ABZR87_RS03330: ABZR87_RS03330 - MarR family transcriptional regulator, at 702,748 to 703,215
_RS03330
ABZR87_RS03335: ABZR87_RS03335 - hypothetical protein, at 703,318 to 703,671
_RS03335
ABZR87_RS03340: ABZR87_RS03340 - VOC family protein, at 703,684 to 704,076
_RS03340
Position (kb) 702
703 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 701.023 kb on + strand at 701.024 kb on - strand at 701.273 kb on - strand, within ABZR87_RS03320 at 701.274 kb on + strand, within ABZR87_RS03320 at 701.274 kb on + strand, within ABZR87_RS03320 at 701.274 kb on + strand, within ABZR87_RS03320 at 701.274 kb on + strand, within ABZR87_RS03320 at 701.275 kb on - strand, within ABZR87_RS03320 at 701.275 kb on - strand, within ABZR87_RS03320 at 701.275 kb on - strand, within ABZR87_RS03320 at 701.275 kb on - strand, within ABZR87_RS03320 at 701.275 kb on - strand, within ABZR87_RS03320 at 701.275 kb on - strand, within ABZR87_RS03320 at 701.409 kb on + strand, within ABZR87_RS03320 at 701.410 kb on - strand, within ABZR87_RS03320 at 701.496 kb on + strand, within ABZR87_RS03320 at 701.496 kb on + strand, within ABZR87_RS03320 at 701.497 kb on - strand, within ABZR87_RS03320 at 701.497 kb on - strand, within ABZR87_RS03320 at 701.497 kb on - strand, within ABZR87_RS03320 at 701.505 kb on + strand, within ABZR87_RS03320 at 701.505 kb on + strand, within ABZR87_RS03320 at 701.506 kb on - strand, within ABZR87_RS03320 at 701.506 kb on - strand, within ABZR87_RS03320 at 701.595 kb on + strand at 701.595 kb on + strand at 701.595 kb on + strand at 701.595 kb on + strand at 701.596 kb on - strand at 701.596 kb on - strand at 701.671 kb on + strand at 701.671 kb on + strand at 701.671 kb on + strand at 701.671 kb on + strand at 701.671 kb on + strand at 701.671 kb on + strand at 701.672 kb on - strand at 701.821 kb on + strand at 701.821 kb on + strand at 701.834 kb on + strand at 701.834 kb on + strand at 701.892 kb on + strand at 701.892 kb on + strand at 701.892 kb on + strand at 701.892 kb on + strand at 701.897 kb on + strand at 701.897 kb on + strand at 701.897 kb on + strand at 701.898 kb on - strand at 701.898 kb on - strand at 701.898 kb on - strand at 701.900 kb on + strand at 701.900 kb on + strand at 701.900 kb on + strand at 701.900 kb on + strand at 701.901 kb on - strand at 701.901 kb on - strand at 702.116 kb on + strand, within ABZR87_RS03325 at 702.116 kb on + strand, within ABZR87_RS03325 at 702.116 kb on + strand, within ABZR87_RS03325 at 702.116 kb on + strand, within ABZR87_RS03325 at 702.239 kb on - strand, within ABZR87_RS03325 at 702.239 kb on - strand, within ABZR87_RS03325 at 702.239 kb on - strand, within ABZR87_RS03325 at 702.239 kb on - strand, within ABZR87_RS03325 at 702.239 kb on - strand, within ABZR87_RS03325 at 702.239 kb on - strand, within ABZR87_RS03325 at 702.239 kb on - strand, within ABZR87_RS03325 at 702.283 kb on + strand, within ABZR87_RS03325 at 702.283 kb on + strand, within ABZR87_RS03325 at 702.284 kb on - strand, within ABZR87_RS03325 at 702.284 kb on - strand, within ABZR87_RS03325 at 702.284 kb on - strand, within ABZR87_RS03325 at 702.326 kb on - strand, within ABZR87_RS03325 at 702.326 kb on - strand, within ABZR87_RS03325 at 702.463 kb on + strand, within ABZR87_RS03325 at 702.463 kb on + strand, within ABZR87_RS03325 at 702.463 kb on + strand, within ABZR87_RS03325 at 702.463 kb on + strand, within ABZR87_RS03325 at 702.463 kb on + strand, within ABZR87_RS03325 at 702.463 kb on + strand, within ABZR87_RS03325 at 702.463 kb on + strand, within ABZR87_RS03325 at 702.463 kb on + strand, within ABZR87_RS03325 at 702.464 kb on - strand, within ABZR87_RS03325 at 702.464 kb on - strand, within ABZR87_RS03325 at 702.464 kb on - strand, within ABZR87_RS03325 at 702.464 kb on - strand, within ABZR87_RS03325 at 702.464 kb on - strand, within ABZR87_RS03325 at 702.532 kb on + strand, within ABZR87_RS03325 at 702.533 kb on - strand, within ABZR87_RS03325 at 702.533 kb on - strand, within ABZR87_RS03325 at 702.533 kb on - strand, within ABZR87_RS03325 at 702.533 kb on - strand, within ABZR87_RS03325 at 702.533 kb on - strand, within ABZR87_RS03325 at 702.538 kb on + strand, within ABZR87_RS03325 at 702.556 kb on + strand, within ABZR87_RS03325 at 702.556 kb on + strand, within ABZR87_RS03325 at 702.631 kb on + strand, within ABZR87_RS03325 at 702.631 kb on + strand, within ABZR87_RS03325 at 702.631 kb on + strand, within ABZR87_RS03325 at 702.631 kb on + strand, within ABZR87_RS03325 at 702.631 kb on + strand, within ABZR87_RS03325 at 702.632 kb on - strand, within ABZR87_RS03325 at 702.632 kb on - strand, within ABZR87_RS03325 at 702.632 kb on - strand, within ABZR87_RS03325 at 702.632 kb on - strand, within ABZR87_RS03325 at 702.632 kb on - strand, within ABZR87_RS03325 at 702.632 kb on - strand, within ABZR87_RS03325 at 702.632 kb on - strand, within ABZR87_RS03325 at 702.632 kb on - strand, within ABZR87_RS03325 at 702.632 kb on - strand, within ABZR87_RS03325 at 702.632 kb on - strand, within ABZR87_RS03325 at 702.632 kb on - strand, within ABZR87_RS03325 at 702.632 kb on - strand, within ABZR87_RS03325 at 702.715 kb on + strand at 702.716 kb on - strand at 702.716 kb on - strand at 702.716 kb on - strand at 702.716 kb on - strand at 702.716 kb on - strand at 702.716 kb on - strand at 702.762 kb on + strand at 702.762 kb on + strand at 702.762 kb on + strand at 702.763 kb on - strand at 702.763 kb on - strand at 702.763 kb on - strand at 702.763 kb on - strand at 702.763 kb on - strand at 702.763 kb on - strand at 702.763 kb on - strand at 702.976 kb on + strand, within ABZR87_RS03330 at 702.976 kb on + strand, within ABZR87_RS03330 at 702.977 kb on - strand, within ABZR87_RS03330 at 702.977 kb on - strand, within ABZR87_RS03330 at 702.977 kb on - strand, within ABZR87_RS03330 at 702.977 kb on - strand, within ABZR87_RS03330 at 702.977 kb on - strand, within ABZR87_RS03330 at 703.038 kb on + strand, within ABZR87_RS03330 at 703.039 kb on - strand, within ABZR87_RS03330 at 703.060 kb on - strand, within ABZR87_RS03330 at 703.224 kb on - strand at 703.228 kb on + strand at 703.258 kb on - strand at 703.568 kb on + strand, within ABZR87_RS03335 at 703.568 kb on + strand, within ABZR87_RS03335 at 703.569 kb on - strand, within ABZR87_RS03335 at 703.569 kb on - strand, within ABZR87_RS03335 at 703.569 kb on - strand, within ABZR87_RS03335 at 703.660 kb on + strand at 703.660 kb on + strand at 703.660 kb on + strand at 703.660 kb on + strand at 703.661 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction C.elegans, mixed culture-2 remove 701,023 + +0.2 701,024 - +0.7 701,273 - ABZR87_RS03320 0.36 +0.3 701,274 + ABZR87_RS03320 0.37 +0.4 701,274 + ABZR87_RS03320 0.37 -0.4 701,274 + ABZR87_RS03320 0.37 +1.6 701,274 + ABZR87_RS03320 0.37 -2.5 701,275 - ABZR87_RS03320 0.37 +0.8 701,275 - ABZR87_RS03320 0.37 +0.4 701,275 - ABZR87_RS03320 0.37 +0.2 701,275 - ABZR87_RS03320 0.37 +0.1 701,275 - ABZR87_RS03320 0.37 -0.7 701,275 - ABZR87_RS03320 0.37 -0.5 701,409 + ABZR87_RS03320 0.61 +0.6 701,410 - ABZR87_RS03320 0.61 -0.4 701,496 + ABZR87_RS03320 0.77 -0.5 701,496 + ABZR87_RS03320 0.77 +0.6 701,497 - ABZR87_RS03320 0.77 -0.7 701,497 - ABZR87_RS03320 0.77 -0.4 701,497 - ABZR87_RS03320 0.77 +0.8 701,505 + ABZR87_RS03320 0.78 -0.8 701,505 + ABZR87_RS03320 0.78 +0.6 701,506 - ABZR87_RS03320 0.79 +0.3 701,506 - ABZR87_RS03320 0.79 +0.7 701,595 + +0.2 701,595 + -0.1 701,595 + +0.4 701,595 + +0.2 701,596 - -0.0 701,596 - -0.0 701,671 + +0.1 701,671 + -0.4 701,671 + -0.1 701,671 + +0.1 701,671 + +0.0 701,671 + -1.0 701,672 - +0.2 701,821 + +1.0 701,821 + -0.2 701,834 + +2.8 701,834 + -0.1 701,892 + -0.3 701,892 + -0.2 701,892 + +1.2 701,892 + +0.6 701,897 + +0.4 701,897 + -0.3 701,897 + -1.4 701,898 - -0.6 701,898 - +0.4 701,898 - -0.1 701,900 + +0.1 701,900 + +0.6 701,900 + -1.1 701,900 + -0.1 701,901 - +0.6 701,901 - +0.8 702,116 + ABZR87_RS03325 0.14 -0.5 702,116 + ABZR87_RS03325 0.14 -0.6 702,116 + ABZR87_RS03325 0.14 +0.0 702,116 + ABZR87_RS03325 0.14 -0.9 702,239 - ABZR87_RS03325 0.31 -1.5 702,239 - ABZR87_RS03325 0.31 -1.4 702,239 - ABZR87_RS03325 0.31 -0.8 702,239 - ABZR87_RS03325 0.31 -0.3 702,239 - ABZR87_RS03325 0.31 -0.3 702,239 - ABZR87_RS03325 0.31 +0.7 702,239 - ABZR87_RS03325 0.31 +0.6 702,283 + ABZR87_RS03325 0.38 -1.3 702,283 + ABZR87_RS03325 0.38 +1.1 702,284 - ABZR87_RS03325 0.38 -0.8 702,284 - ABZR87_RS03325 0.38 -0.2 702,284 - ABZR87_RS03325 0.38 -0.3 702,326 - ABZR87_RS03325 0.44 -0.1 702,326 - ABZR87_RS03325 0.44 -2.0 702,463 + ABZR87_RS03325 0.63 -0.2 702,463 + ABZR87_RS03325 0.63 -0.4 702,463 + ABZR87_RS03325 0.63 -1.6 702,463 + ABZR87_RS03325 0.63 +0.0 702,463 + ABZR87_RS03325 0.63 +0.2 702,463 + ABZR87_RS03325 0.63 -0.4 702,463 + ABZR87_RS03325 0.63 -0.3 702,463 + ABZR87_RS03325 0.63 -1.0 702,464 - ABZR87_RS03325 0.64 +0.2 702,464 - ABZR87_RS03325 0.64 -0.8 702,464 - ABZR87_RS03325 0.64 -2.0 702,464 - ABZR87_RS03325 0.64 -1.0 702,464 - ABZR87_RS03325 0.64 -0.4 702,532 + ABZR87_RS03325 0.73 -0.1 702,533 - ABZR87_RS03325 0.73 -0.8 702,533 - ABZR87_RS03325 0.73 +0.5 702,533 - ABZR87_RS03325 0.73 -0.4 702,533 - ABZR87_RS03325 0.73 -0.6 702,533 - ABZR87_RS03325 0.73 +0.5 702,538 + ABZR87_RS03325 0.74 -1.2 702,556 + ABZR87_RS03325 0.77 -0.6 702,556 + ABZR87_RS03325 0.77 -1.5 702,631 + ABZR87_RS03325 0.88 -0.4 702,631 + ABZR87_RS03325 0.88 +0.0 702,631 + ABZR87_RS03325 0.88 -1.5 702,631 + ABZR87_RS03325 0.88 -1.2 702,631 + ABZR87_RS03325 0.88 +0.5 702,632 - ABZR87_RS03325 0.88 +0.3 702,632 - ABZR87_RS03325 0.88 -0.9 702,632 - ABZR87_RS03325 0.88 +0.4 702,632 - ABZR87_RS03325 0.88 +0.1 702,632 - ABZR87_RS03325 0.88 +0.4 702,632 - ABZR87_RS03325 0.88 -0.7 702,632 - ABZR87_RS03325 0.88 -0.7 702,632 - ABZR87_RS03325 0.88 +0.2 702,632 - ABZR87_RS03325 0.88 -1.3 702,632 - ABZR87_RS03325 0.88 -0.0 702,632 - ABZR87_RS03325 0.88 -0.4 702,632 - ABZR87_RS03325 0.88 -0.3 702,715 + -1.0 702,716 - +0.6 702,716 - +3.5 702,716 - -0.9 702,716 - -0.5 702,716 - -0.5 702,716 - +0.1 702,762 + +0.7 702,762 + +0.3 702,762 + -1.5 702,763 - -0.5 702,763 - -0.5 702,763 - +0.6 702,763 - -0.7 702,763 - +0.1 702,763 - +0.1 702,763 - -0.4 702,976 + ABZR87_RS03330 0.49 -0.2 702,976 + ABZR87_RS03330 0.49 -0.9 702,977 - ABZR87_RS03330 0.49 -0.3 702,977 - ABZR87_RS03330 0.49 -1.0 702,977 - ABZR87_RS03330 0.49 -2.8 702,977 - ABZR87_RS03330 0.49 -0.9 702,977 - ABZR87_RS03330 0.49 -0.1 703,038 + ABZR87_RS03330 0.62 -3.0 703,039 - ABZR87_RS03330 0.62 +0.4 703,060 - ABZR87_RS03330 0.67 -0.0 703,224 - +1.0 703,228 + -0.3 703,258 - +0.6 703,568 + ABZR87_RS03335 0.71 -0.1 703,568 + ABZR87_RS03335 0.71 -0.8 703,569 - ABZR87_RS03335 0.71 +0.7 703,569 - ABZR87_RS03335 0.71 +0.2 703,569 - ABZR87_RS03335 0.71 +0.6 703,660 + -0.6 703,660 + +0.3 703,660 + +0.7 703,660 + -0.2 703,661 - +0.6
Or see this region's nucleotide sequence