Experiment: C.elegans, mixed culture-2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS03160 and ABZR87_RS03165 are separated by 119 nucleotides ABZR87_RS03165 and ABZR87_RS03170 are separated by 41 nucleotides ABZR87_RS03170 and ABZR87_RS03175 are separated by 41 nucleotides ABZR87_RS03175 and ABZR87_RS03180 are separated by 335 nucleotides
ABZR87_RS03160: ABZR87_RS03160 - MFS transporter, at 665,275 to 666,528
_RS03160
ABZR87_RS03165: ABZR87_RS03165 - glutathione S-transferase, at 666,648 to 667,364
_RS03165
ABZR87_RS03170: ABZR87_RS03170 - hypothetical protein, at 667,406 to 667,795
_RS03170
ABZR87_RS03175: ABZR87_RS03175 - hypothetical protein, at 667,837 to 668,259
_RS03175
ABZR87_RS03180: ABZR87_RS03180 - hypothetical protein, at 668,595 to 668,822
_RS03180
Position (kb) 667
668 Strain fitness (log2 ratio) -2
-1
0
1
2 at 666.449 kb on + strand at 666.564 kb on + strand at 666.564 kb on + strand at 666.564 kb on + strand at 666.565 kb on - strand at 666.565 kb on - strand at 666.567 kb on + strand at 666.567 kb on + strand at 666.567 kb on + strand at 666.568 kb on - strand at 666.663 kb on + strand at 666.663 kb on + strand at 666.663 kb on + strand at 666.663 kb on + strand at 666.664 kb on - strand at 666.664 kb on - strand at 666.664 kb on - strand at 666.664 kb on - strand at 666.664 kb on - strand at 666.664 kb on - strand at 666.666 kb on + strand at 666.666 kb on + strand at 666.666 kb on + strand at 666.666 kb on + strand at 666.666 kb on + strand at 666.732 kb on + strand, within ABZR87_RS03165 at 666.732 kb on + strand, within ABZR87_RS03165 at 666.733 kb on - strand, within ABZR87_RS03165 at 666.733 kb on - strand, within ABZR87_RS03165 at 666.733 kb on - strand, within ABZR87_RS03165 at 666.734 kb on + strand, within ABZR87_RS03165 at 666.734 kb on + strand, within ABZR87_RS03165 at 666.734 kb on + strand, within ABZR87_RS03165 at 666.734 kb on + strand, within ABZR87_RS03165 at 666.735 kb on - strand, within ABZR87_RS03165 at 666.735 kb on - strand, within ABZR87_RS03165 at 666.870 kb on + strand, within ABZR87_RS03165 at 666.870 kb on + strand, within ABZR87_RS03165 at 666.870 kb on + strand, within ABZR87_RS03165 at 666.871 kb on - strand, within ABZR87_RS03165 at 666.871 kb on - strand, within ABZR87_RS03165 at 666.871 kb on - strand, within ABZR87_RS03165 at 666.871 kb on - strand, within ABZR87_RS03165 at 666.871 kb on - strand, within ABZR87_RS03165 at 667.003 kb on - strand, within ABZR87_RS03165 at 667.003 kb on - strand, within ABZR87_RS03165 at 667.005 kb on + strand, within ABZR87_RS03165 at 667.005 kb on + strand, within ABZR87_RS03165 at 667.005 kb on + strand, within ABZR87_RS03165 at 667.005 kb on + strand, within ABZR87_RS03165 at 667.006 kb on - strand, within ABZR87_RS03165 at 667.006 kb on - strand, within ABZR87_RS03165 at 667.006 kb on - strand, within ABZR87_RS03165 at 667.006 kb on - strand, within ABZR87_RS03165 at 667.080 kb on + strand, within ABZR87_RS03165 at 667.080 kb on + strand, within ABZR87_RS03165 at 667.080 kb on + strand, within ABZR87_RS03165 at 667.080 kb on + strand, within ABZR87_RS03165 at 667.080 kb on + strand, within ABZR87_RS03165 at 667.081 kb on - strand, within ABZR87_RS03165 at 667.081 kb on - strand, within ABZR87_RS03165 at 667.081 kb on - strand, within ABZR87_RS03165 at 667.081 kb on - strand, within ABZR87_RS03165 at 667.146 kb on + strand, within ABZR87_RS03165 at 667.146 kb on + strand, within ABZR87_RS03165 at 667.146 kb on + strand, within ABZR87_RS03165 at 667.146 kb on + strand, within ABZR87_RS03165 at 667.146 kb on + strand, within ABZR87_RS03165 at 667.146 kb on + strand, within ABZR87_RS03165 at 667.146 kb on + strand, within ABZR87_RS03165 at 667.146 kb on + strand, within ABZR87_RS03165 at 667.146 kb on + strand, within ABZR87_RS03165 at 667.146 kb on + strand, within ABZR87_RS03165 at 667.146 kb on + strand, within ABZR87_RS03165 at 667.146 kb on + strand, within ABZR87_RS03165 at 667.147 kb on - strand, within ABZR87_RS03165 at 667.147 kb on - strand, within ABZR87_RS03165 at 667.147 kb on - strand, within ABZR87_RS03165 at 667.147 kb on - strand, within ABZR87_RS03165 at 667.147 kb on - strand, within ABZR87_RS03165 at 667.147 kb on - strand, within ABZR87_RS03165 at 667.147 kb on - strand, within ABZR87_RS03165 at 667.147 kb on - strand, within ABZR87_RS03165 at 667.147 kb on - strand, within ABZR87_RS03165 at 667.215 kb on + strand, within ABZR87_RS03165 at 667.284 kb on + strand, within ABZR87_RS03165 at 667.424 kb on - strand at 667.451 kb on + strand, within ABZR87_RS03170 at 667.451 kb on + strand, within ABZR87_RS03170 at 667.629 kb on + strand, within ABZR87_RS03170 at 667.629 kb on + strand, within ABZR87_RS03170 at 667.629 kb on + strand, within ABZR87_RS03170 at 667.629 kb on + strand, within ABZR87_RS03170 at 667.629 kb on + strand, within ABZR87_RS03170 at 667.629 kb on + strand, within ABZR87_RS03170 at 667.629 kb on + strand, within ABZR87_RS03170 at 667.630 kb on - strand, within ABZR87_RS03170 at 667.630 kb on - strand, within ABZR87_RS03170 at 667.630 kb on - strand, within ABZR87_RS03170 at 667.630 kb on - strand, within ABZR87_RS03170 at 667.630 kb on - strand, within ABZR87_RS03170 at 667.630 kb on - strand, within ABZR87_RS03170 at 667.630 kb on - strand, within ABZR87_RS03170 at 667.810 kb on + strand at 667.810 kb on + strand at 667.845 kb on + strand at 667.846 kb on - strand at 668.033 kb on + strand, within ABZR87_RS03175 at 668.033 kb on + strand, within ABZR87_RS03175 at 668.033 kb on + strand, within ABZR87_RS03175 at 668.034 kb on - strand, within ABZR87_RS03175 at 668.034 kb on - strand, within ABZR87_RS03175 at 668.066 kb on + strand, within ABZR87_RS03175 at 668.066 kb on + strand, within ABZR87_RS03175 at 668.066 kb on + strand, within ABZR87_RS03175 at 668.067 kb on - strand, within ABZR87_RS03175 at 668.067 kb on - strand, within ABZR87_RS03175 at 668.067 kb on - strand, within ABZR87_RS03175 at 668.099 kb on + strand, within ABZR87_RS03175 at 668.100 kb on - strand, within ABZR87_RS03175 at 668.156 kb on + strand, within ABZR87_RS03175 at 668.156 kb on + strand, within ABZR87_RS03175 at 668.156 kb on + strand, within ABZR87_RS03175 at 668.156 kb on + strand, within ABZR87_RS03175 at 668.157 kb on - strand, within ABZR87_RS03175 at 668.225 kb on + strand at 668.226 kb on - strand at 668.226 kb on - strand at 668.246 kb on + strand at 668.246 kb on + strand at 668.246 kb on + strand at 668.246 kb on + strand at 668.246 kb on + strand at 668.246 kb on + strand at 668.246 kb on + strand at 668.247 kb on - strand at 668.247 kb on - strand at 668.247 kb on - strand at 668.247 kb on - strand at 668.247 kb on - strand at 668.247 kb on - strand at 668.364 kb on + strand at 668.364 kb on + strand at 668.364 kb on + strand at 668.364 kb on + strand at 668.364 kb on + strand at 668.365 kb on - strand at 668.365 kb on - strand at 668.365 kb on - strand at 668.365 kb on - strand at 668.365 kb on - strand at 668.365 kb on - strand at 668.365 kb on - strand at 668.365 kb on - strand at 668.365 kb on - strand at 668.415 kb on + strand at 668.415 kb on + strand at 668.415 kb on + strand at 668.415 kb on + strand at 668.415 kb on + strand at 668.415 kb on + strand at 668.416 kb on - strand at 668.416 kb on - strand at 668.426 kb on + strand at 668.426 kb on + strand at 668.480 kb on + strand at 668.480 kb on + strand at 668.481 kb on - strand at 668.518 kb on - strand at 668.583 kb on + strand at 668.596 kb on + strand at 668.596 kb on + strand at 668.596 kb on + strand at 668.596 kb on + strand at 668.597 kb on - strand at 668.597 kb on - strand at 668.597 kb on - strand at 668.674 kb on + strand, within ABZR87_RS03180 at 668.675 kb on - strand, within ABZR87_RS03180 at 668.675 kb on - strand, within ABZR87_RS03180
Per-strain Table
Position Strand Gene LocusTag Fraction C.elegans, mixed culture-2 remove 666,449 + +0.8 666,564 + -0.9 666,564 + -1.0 666,564 + -0.6 666,565 - +0.7 666,565 - +0.2 666,567 + -0.7 666,567 + +0.8 666,567 + -0.2 666,568 - -1.1 666,663 + +0.2 666,663 + +0.1 666,663 + +0.5 666,663 + -0.5 666,664 - -0.5 666,664 - -1.5 666,664 - +0.5 666,664 - +0.6 666,664 - -0.0 666,664 - +0.7 666,666 + +1.0 666,666 + -1.0 666,666 + -1.3 666,666 + +0.5 666,666 + -0.2 666,732 + ABZR87_RS03165 0.12 +0.1 666,732 + ABZR87_RS03165 0.12 -0.8 666,733 - ABZR87_RS03165 0.12 -1.3 666,733 - ABZR87_RS03165 0.12 -0.1 666,733 - ABZR87_RS03165 0.12 -0.6 666,734 + ABZR87_RS03165 0.12 -0.0 666,734 + ABZR87_RS03165 0.12 -1.0 666,734 + ABZR87_RS03165 0.12 -0.2 666,734 + ABZR87_RS03165 0.12 -0.5 666,735 - ABZR87_RS03165 0.12 -0.5 666,735 - ABZR87_RS03165 0.12 +0.3 666,870 + ABZR87_RS03165 0.31 +0.6 666,870 + ABZR87_RS03165 0.31 -0.9 666,870 + ABZR87_RS03165 0.31 -0.5 666,871 - ABZR87_RS03165 0.31 -2.4 666,871 - ABZR87_RS03165 0.31 -2.0 666,871 - ABZR87_RS03165 0.31 -0.4 666,871 - ABZR87_RS03165 0.31 +0.3 666,871 - ABZR87_RS03165 0.31 +0.3 667,003 - ABZR87_RS03165 0.50 -0.7 667,003 - ABZR87_RS03165 0.50 -0.2 667,005 + ABZR87_RS03165 0.50 -0.5 667,005 + ABZR87_RS03165 0.50 +0.6 667,005 + ABZR87_RS03165 0.50 -1.4 667,005 + ABZR87_RS03165 0.50 -0.7 667,006 - ABZR87_RS03165 0.50 +0.1 667,006 - ABZR87_RS03165 0.50 +1.7 667,006 - ABZR87_RS03165 0.50 +0.2 667,006 - ABZR87_RS03165 0.50 -1.6 667,080 + ABZR87_RS03165 0.60 -0.9 667,080 + ABZR87_RS03165 0.60 +0.3 667,080 + ABZR87_RS03165 0.60 -0.6 667,080 + ABZR87_RS03165 0.60 -0.3 667,080 + ABZR87_RS03165 0.60 -0.9 667,081 - ABZR87_RS03165 0.60 -0.1 667,081 - ABZR87_RS03165 0.60 -0.3 667,081 - ABZR87_RS03165 0.60 -0.9 667,081 - ABZR87_RS03165 0.60 -0.3 667,146 + ABZR87_RS03165 0.69 -0.0 667,146 + ABZR87_RS03165 0.69 -0.9 667,146 + ABZR87_RS03165 0.69 +0.6 667,146 + ABZR87_RS03165 0.69 -0.8 667,146 + ABZR87_RS03165 0.69 -0.2 667,146 + ABZR87_RS03165 0.69 +0.2 667,146 + ABZR87_RS03165 0.69 +0.1 667,146 + ABZR87_RS03165 0.69 +0.7 667,146 + ABZR87_RS03165 0.69 +0.0 667,146 + ABZR87_RS03165 0.69 -0.1 667,146 + ABZR87_RS03165 0.69 +1.7 667,146 + ABZR87_RS03165 0.69 +0.6 667,147 - ABZR87_RS03165 0.70 -0.3 667,147 - ABZR87_RS03165 0.70 -0.6 667,147 - ABZR87_RS03165 0.70 +0.7 667,147 - ABZR87_RS03165 0.70 -0.2 667,147 - ABZR87_RS03165 0.70 -0.3 667,147 - ABZR87_RS03165 0.70 -0.1 667,147 - ABZR87_RS03165 0.70 +0.8 667,147 - ABZR87_RS03165 0.70 +0.8 667,147 - ABZR87_RS03165 0.70 -0.8 667,215 + ABZR87_RS03165 0.79 +0.0 667,284 + ABZR87_RS03165 0.89 -1.2 667,424 - +0.4 667,451 + ABZR87_RS03170 0.12 -0.1 667,451 + ABZR87_RS03170 0.12 -1.9 667,629 + ABZR87_RS03170 0.57 +0.2 667,629 + ABZR87_RS03170 0.57 +0.3 667,629 + ABZR87_RS03170 0.57 +0.4 667,629 + ABZR87_RS03170 0.57 -1.6 667,629 + ABZR87_RS03170 0.57 +0.4 667,629 + ABZR87_RS03170 0.57 +0.1 667,629 + ABZR87_RS03170 0.57 +1.0 667,630 - ABZR87_RS03170 0.57 +0.7 667,630 - ABZR87_RS03170 0.57 -0.2 667,630 - ABZR87_RS03170 0.57 +0.1 667,630 - ABZR87_RS03170 0.57 +0.2 667,630 - ABZR87_RS03170 0.57 +0.2 667,630 - ABZR87_RS03170 0.57 -0.1 667,630 - ABZR87_RS03170 0.57 +0.3 667,810 + +2.0 667,810 + -0.3 667,845 + -0.3 667,846 - +1.0 668,033 + ABZR87_RS03175 0.46 -0.1 668,033 + ABZR87_RS03175 0.46 +1.4 668,033 + ABZR87_RS03175 0.46 -0.9 668,034 - ABZR87_RS03175 0.47 -0.9 668,034 - ABZR87_RS03175 0.47 -0.9 668,066 + ABZR87_RS03175 0.54 -0.1 668,066 + ABZR87_RS03175 0.54 +0.6 668,066 + ABZR87_RS03175 0.54 -0.1 668,067 - ABZR87_RS03175 0.54 +0.4 668,067 - ABZR87_RS03175 0.54 +0.3 668,067 - ABZR87_RS03175 0.54 -0.5 668,099 + ABZR87_RS03175 0.62 +1.7 668,100 - ABZR87_RS03175 0.62 +0.6 668,156 + ABZR87_RS03175 0.75 -0.6 668,156 + ABZR87_RS03175 0.75 -0.4 668,156 + ABZR87_RS03175 0.75 +0.2 668,156 + ABZR87_RS03175 0.75 -0.4 668,157 - ABZR87_RS03175 0.76 -0.0 668,225 + +0.1 668,226 - +0.4 668,226 - -0.0 668,246 + +0.6 668,246 + +0.6 668,246 + -0.3 668,246 + -0.3 668,246 + -0.7 668,246 + -1.6 668,246 + -0.1 668,247 - -1.2 668,247 - +0.1 668,247 - +0.1 668,247 - -0.2 668,247 - +1.9 668,247 - -0.0 668,364 + -2.1 668,364 + +0.7 668,364 + +0.4 668,364 + -0.7 668,364 + -1.1 668,365 - +0.9 668,365 - -0.1 668,365 - +0.3 668,365 - -0.0 668,365 - +0.7 668,365 - -0.4 668,365 - -0.8 668,365 - -0.5 668,365 - +1.4 668,415 + -0.2 668,415 + -0.4 668,415 + -0.2 668,415 + +0.4 668,415 + -2.0 668,415 + -0.0 668,416 - -0.1 668,416 - -0.1 668,426 + -0.3 668,426 + +1.3 668,480 + +0.7 668,480 + +0.2 668,481 - +0.3 668,518 - -0.1 668,583 + -1.5 668,596 + -1.6 668,596 + -0.6 668,596 + -0.7 668,596 + +0.0 668,597 - +0.5 668,597 - -0.8 668,597 - -0.7 668,674 + ABZR87_RS03180 0.35 -0.7 668,675 - ABZR87_RS03180 0.35 -1.5 668,675 - ABZR87_RS03180 0.35 -0.3
Or see this region's nucleotide sequence