Experiment: C.elegans, mixed culture-2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS03145 and ABZR87_RS03150 are separated by 287 nucleotides ABZR87_RS03150 and ABZR87_RS03155 are separated by 280 nucleotides
ABZR87_RS03145: ABZR87_RS03145 - MurR/RpiR family transcriptional regulator, at 660,457 to 661,320
_RS03145
ABZR87_RS03150: ABZR87_RS03150 - porin, at 661,608 to 662,654
_RS03150
ABZR87_RS03155: ABZR87_RS03155 - mechanosensitive ion channel family protein, at 662,935 to 665,208
_RS03155
Position (kb) 661
662
663 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 660.714 kb on - strand, within ABZR87_RS03145 at 660.734 kb on + strand, within ABZR87_RS03145 at 660.734 kb on + strand, within ABZR87_RS03145 at 660.734 kb on + strand, within ABZR87_RS03145 at 660.734 kb on + strand, within ABZR87_RS03145 at 660.734 kb on + strand, within ABZR87_RS03145 at 660.735 kb on - strand, within ABZR87_RS03145 at 660.735 kb on - strand, within ABZR87_RS03145 at 660.735 kb on - strand, within ABZR87_RS03145 at 660.825 kb on - strand, within ABZR87_RS03145 at 660.905 kb on + strand, within ABZR87_RS03145 at 660.905 kb on + strand, within ABZR87_RS03145 at 660.905 kb on + strand, within ABZR87_RS03145 at 660.906 kb on - strand, within ABZR87_RS03145 at 661.327 kb on + strand at 661.327 kb on + strand at 661.327 kb on + strand at 661.327 kb on + strand at 661.327 kb on + strand at 661.327 kb on + strand at 661.327 kb on + strand at 661.327 kb on + strand at 661.328 kb on - strand at 661.328 kb on - strand at 661.328 kb on - strand at 661.328 kb on - strand at 661.328 kb on - strand at 661.363 kb on + strand at 661.364 kb on - strand at 661.417 kb on + strand at 661.418 kb on - strand at 661.418 kb on - strand at 661.502 kb on + strand at 661.502 kb on + strand at 661.503 kb on - strand at 661.515 kb on + strand at 661.515 kb on + strand at 661.516 kb on - strand at 661.516 kb on - strand at 661.516 kb on - strand at 661.516 kb on - strand at 661.588 kb on + strand at 661.596 kb on + strand at 661.596 kb on + strand at 661.596 kb on + strand at 661.596 kb on + strand at 661.596 kb on + strand at 661.596 kb on + strand at 661.597 kb on - strand at 661.597 kb on - strand at 661.597 kb on - strand at 661.597 kb on - strand at 661.597 kb on - strand at 661.597 kb on - strand at 661.597 kb on - strand at 661.597 kb on - strand at 661.704 kb on + strand at 661.704 kb on + strand at 661.705 kb on - strand at 661.731 kb on + strand, within ABZR87_RS03150 at 661.732 kb on - strand, within ABZR87_RS03150 at 661.732 kb on - strand, within ABZR87_RS03150 at 661.785 kb on + strand, within ABZR87_RS03150 at 661.785 kb on + strand, within ABZR87_RS03150 at 661.786 kb on - strand, within ABZR87_RS03150 at 661.788 kb on + strand, within ABZR87_RS03150 at 661.788 kb on + strand, within ABZR87_RS03150 at 661.788 kb on + strand, within ABZR87_RS03150 at 661.789 kb on - strand, within ABZR87_RS03150 at 661.789 kb on - strand, within ABZR87_RS03150 at 661.920 kb on + strand, within ABZR87_RS03150 at 661.920 kb on + strand, within ABZR87_RS03150 at 661.968 kb on + strand, within ABZR87_RS03150 at 661.968 kb on + strand, within ABZR87_RS03150 at 661.968 kb on + strand, within ABZR87_RS03150 at 661.968 kb on + strand, within ABZR87_RS03150 at 661.968 kb on + strand, within ABZR87_RS03150 at 661.968 kb on + strand, within ABZR87_RS03150 at 661.968 kb on + strand, within ABZR87_RS03150 at 661.968 kb on + strand, within ABZR87_RS03150 at 661.969 kb on - strand, within ABZR87_RS03150 at 661.969 kb on - strand, within ABZR87_RS03150 at 661.969 kb on - strand, within ABZR87_RS03150 at 661.969 kb on - strand, within ABZR87_RS03150 at 661.969 kb on - strand, within ABZR87_RS03150 at 661.969 kb on - strand, within ABZR87_RS03150 at 661.969 kb on - strand, within ABZR87_RS03150 at 661.969 kb on - strand, within ABZR87_RS03150 at 662.130 kb on + strand, within ABZR87_RS03150 at 662.130 kb on + strand, within ABZR87_RS03150 at 662.130 kb on + strand, within ABZR87_RS03150 at 662.130 kb on + strand, within ABZR87_RS03150 at 662.130 kb on + strand, within ABZR87_RS03150 at 662.130 kb on + strand, within ABZR87_RS03150 at 662.130 kb on + strand, within ABZR87_RS03150 at 662.131 kb on - strand, within ABZR87_RS03150 at 662.131 kb on - strand, within ABZR87_RS03150 at 662.131 kb on - strand, within ABZR87_RS03150 at 662.131 kb on - strand, within ABZR87_RS03150 at 662.211 kb on + strand, within ABZR87_RS03150 at 662.211 kb on + strand, within ABZR87_RS03150 at 662.211 kb on + strand, within ABZR87_RS03150 at 662.211 kb on + strand, within ABZR87_RS03150 at 662.211 kb on + strand, within ABZR87_RS03150 at 662.211 kb on + strand, within ABZR87_RS03150 at 662.211 kb on + strand, within ABZR87_RS03150 at 662.212 kb on - strand, within ABZR87_RS03150 at 662.212 kb on - strand, within ABZR87_RS03150 at 662.212 kb on - strand, within ABZR87_RS03150 at 662.232 kb on + strand, within ABZR87_RS03150 at 662.232 kb on + strand, within ABZR87_RS03150 at 662.233 kb on - strand, within ABZR87_RS03150 at 662.233 kb on - strand, within ABZR87_RS03150 at 662.358 kb on + strand, within ABZR87_RS03150 at 662.358 kb on + strand, within ABZR87_RS03150 at 662.359 kb on - strand, within ABZR87_RS03150 at 662.359 kb on - strand, within ABZR87_RS03150 at 662.359 kb on - strand, within ABZR87_RS03150 at 662.359 kb on - strand, within ABZR87_RS03150 at 662.359 kb on - strand, within ABZR87_RS03150 at 662.367 kb on + strand, within ABZR87_RS03150 at 662.436 kb on + strand, within ABZR87_RS03150 at 662.436 kb on + strand, within ABZR87_RS03150 at 662.436 kb on + strand, within ABZR87_RS03150 at 662.436 kb on + strand, within ABZR87_RS03150 at 662.437 kb on - strand, within ABZR87_RS03150 at 662.437 kb on - strand, within ABZR87_RS03150 at 662.437 kb on - strand, within ABZR87_RS03150 at 662.437 kb on - strand, within ABZR87_RS03150 at 662.437 kb on - strand, within ABZR87_RS03150 at 662.437 kb on - strand, within ABZR87_RS03150 at 662.437 kb on - strand, within ABZR87_RS03150 at 662.493 kb on + strand, within ABZR87_RS03150 at 662.494 kb on - strand, within ABZR87_RS03150 at 662.494 kb on - strand, within ABZR87_RS03150 at 662.494 kb on - strand, within ABZR87_RS03150 at 662.503 kb on - strand, within ABZR87_RS03150 at 662.517 kb on + strand, within ABZR87_RS03150 at 662.517 kb on + strand, within ABZR87_RS03150 at 662.517 kb on + strand, within ABZR87_RS03150 at 662.517 kb on + strand, within ABZR87_RS03150 at 662.517 kb on + strand, within ABZR87_RS03150 at 662.518 kb on - strand, within ABZR87_RS03150 at 662.518 kb on - strand, within ABZR87_RS03150 at 662.518 kb on - strand, within ABZR87_RS03150 at 662.518 kb on - strand, within ABZR87_RS03150 at 662.518 kb on - strand, within ABZR87_RS03150 at 662.518 kb on - strand, within ABZR87_RS03150 at 662.544 kb on + strand, within ABZR87_RS03150 at 662.544 kb on + strand, within ABZR87_RS03150 at 662.544 kb on + strand, within ABZR87_RS03150 at 662.544 kb on + strand, within ABZR87_RS03150 at 662.559 kb on + strand at 662.559 kb on + strand at 662.559 kb on + strand at 662.560 kb on - strand at 662.652 kb on + strand at 662.652 kb on + strand at 662.653 kb on - strand at 662.720 kb on + strand at 662.721 kb on - strand at 662.721 kb on - strand at 662.721 kb on - strand at 662.721 kb on - strand at 662.721 kb on - strand at 662.743 kb on - strand at 662.743 kb on - strand at 662.809 kb on - strand at 662.809 kb on - strand at 662.859 kb on - strand at 662.859 kb on - strand at 662.908 kb on + strand at 662.971 kb on - strand at 663.087 kb on + strand at 663.087 kb on + strand at 663.087 kb on + strand at 663.088 kb on - strand at 663.180 kb on - strand, within ABZR87_RS03155 at 663.224 kb on + strand, within ABZR87_RS03155 at 663.225 kb on - strand, within ABZR87_RS03155 at 663.335 kb on + strand, within ABZR87_RS03155 at 663.336 kb on - strand, within ABZR87_RS03155 at 663.336 kb on - strand, within ABZR87_RS03155
Per-strain Table
Position Strand Gene LocusTag Fraction C.elegans, mixed culture-2 remove 660,714 - ABZR87_RS03145 0.30 +0.6 660,734 + ABZR87_RS03145 0.32 -0.5 660,734 + ABZR87_RS03145 0.32 -0.9 660,734 + ABZR87_RS03145 0.32 +0.6 660,734 + ABZR87_RS03145 0.32 -0.0 660,734 + ABZR87_RS03145 0.32 +1.2 660,735 - ABZR87_RS03145 0.32 +0.1 660,735 - ABZR87_RS03145 0.32 +0.4 660,735 - ABZR87_RS03145 0.32 +0.5 660,825 - ABZR87_RS03145 0.43 -0.5 660,905 + ABZR87_RS03145 0.52 -0.2 660,905 + ABZR87_RS03145 0.52 +0.2 660,905 + ABZR87_RS03145 0.52 -0.2 660,906 - ABZR87_RS03145 0.52 -1.6 661,327 + +0.1 661,327 + +0.8 661,327 + -2.2 661,327 + -1.3 661,327 + -0.1 661,327 + -0.3 661,327 + -2.2 661,327 + -0.7 661,328 - +0.3 661,328 - +0.8 661,328 - +0.7 661,328 - -2.8 661,328 - -0.5 661,363 + +1.7 661,364 - -0.1 661,417 + -0.5 661,418 - -0.5 661,418 - -0.5 661,502 + +0.1 661,502 + -1.1 661,503 - +0.8 661,515 + -0.5 661,515 + -0.9 661,516 - +0.3 661,516 - -0.0 661,516 - +0.6 661,516 - +0.0 661,588 + +0.5 661,596 + -1.0 661,596 + +1.1 661,596 + +0.1 661,596 + -2.1 661,596 + -0.2 661,596 + +0.4 661,597 - -0.1 661,597 - +0.0 661,597 - -0.8 661,597 - +0.1 661,597 - -1.8 661,597 - +2.3 661,597 - +0.7 661,597 - +0.6 661,704 + +1.5 661,704 + +0.3 661,705 - -0.3 661,731 + ABZR87_RS03150 0.12 -0.1 661,732 - ABZR87_RS03150 0.12 -0.3 661,732 - ABZR87_RS03150 0.12 +0.1 661,785 + ABZR87_RS03150 0.17 -0.9 661,785 + ABZR87_RS03150 0.17 -0.4 661,786 - ABZR87_RS03150 0.17 +0.3 661,788 + ABZR87_RS03150 0.17 +0.5 661,788 + ABZR87_RS03150 0.17 -1.2 661,788 + ABZR87_RS03150 0.17 +0.3 661,789 - ABZR87_RS03150 0.17 +0.2 661,789 - ABZR87_RS03150 0.17 +0.1 661,920 + ABZR87_RS03150 0.30 +0.1 661,920 + ABZR87_RS03150 0.30 +1.7 661,968 + ABZR87_RS03150 0.34 +0.8 661,968 + ABZR87_RS03150 0.34 -0.2 661,968 + ABZR87_RS03150 0.34 +1.7 661,968 + ABZR87_RS03150 0.34 +0.0 661,968 + ABZR87_RS03150 0.34 +1.1 661,968 + ABZR87_RS03150 0.34 -0.2 661,968 + ABZR87_RS03150 0.34 -0.7 661,968 + ABZR87_RS03150 0.34 +0.4 661,969 - ABZR87_RS03150 0.34 +0.0 661,969 - ABZR87_RS03150 0.34 +1.0 661,969 - ABZR87_RS03150 0.34 -1.7 661,969 - ABZR87_RS03150 0.34 -1.9 661,969 - ABZR87_RS03150 0.34 +0.1 661,969 - ABZR87_RS03150 0.34 -0.0 661,969 - ABZR87_RS03150 0.34 -0.2 661,969 - ABZR87_RS03150 0.34 +1.1 662,130 + ABZR87_RS03150 0.50 -0.5 662,130 + ABZR87_RS03150 0.50 -0.3 662,130 + ABZR87_RS03150 0.50 +0.0 662,130 + ABZR87_RS03150 0.50 -0.1 662,130 + ABZR87_RS03150 0.50 +1.7 662,130 + ABZR87_RS03150 0.50 +0.6 662,130 + ABZR87_RS03150 0.50 +1.7 662,131 - ABZR87_RS03150 0.50 -0.5 662,131 - ABZR87_RS03150 0.50 +0.7 662,131 - ABZR87_RS03150 0.50 -0.2 662,131 - ABZR87_RS03150 0.50 -0.2 662,211 + ABZR87_RS03150 0.58 +0.6 662,211 + ABZR87_RS03150 0.58 -0.3 662,211 + ABZR87_RS03150 0.58 +0.8 662,211 + ABZR87_RS03150 0.58 +0.8 662,211 + ABZR87_RS03150 0.58 +0.0 662,211 + ABZR87_RS03150 0.58 +0.6 662,211 + ABZR87_RS03150 0.58 +0.8 662,212 - ABZR87_RS03150 0.58 -0.4 662,212 - ABZR87_RS03150 0.58 -0.2 662,212 - ABZR87_RS03150 0.58 -1.3 662,232 + ABZR87_RS03150 0.60 +0.2 662,232 + ABZR87_RS03150 0.60 +0.6 662,233 - ABZR87_RS03150 0.60 -0.2 662,233 - ABZR87_RS03150 0.60 +0.1 662,358 + ABZR87_RS03150 0.72 -0.5 662,358 + ABZR87_RS03150 0.72 -0.3 662,359 - ABZR87_RS03150 0.72 -0.4 662,359 - ABZR87_RS03150 0.72 -0.0 662,359 - ABZR87_RS03150 0.72 +0.1 662,359 - ABZR87_RS03150 0.72 +1.5 662,359 - ABZR87_RS03150 0.72 +0.5 662,367 + ABZR87_RS03150 0.72 -0.2 662,436 + ABZR87_RS03150 0.79 +0.1 662,436 + ABZR87_RS03150 0.79 -0.5 662,436 + ABZR87_RS03150 0.79 -0.7 662,436 + ABZR87_RS03150 0.79 -0.4 662,437 - ABZR87_RS03150 0.79 +0.0 662,437 - ABZR87_RS03150 0.79 -0.7 662,437 - ABZR87_RS03150 0.79 +0.4 662,437 - ABZR87_RS03150 0.79 -0.3 662,437 - ABZR87_RS03150 0.79 +0.3 662,437 - ABZR87_RS03150 0.79 -0.3 662,437 - ABZR87_RS03150 0.79 -0.2 662,493 + ABZR87_RS03150 0.85 +0.1 662,494 - ABZR87_RS03150 0.85 +0.5 662,494 - ABZR87_RS03150 0.85 +0.1 662,494 - ABZR87_RS03150 0.85 +0.4 662,503 - ABZR87_RS03150 0.85 +0.6 662,517 + ABZR87_RS03150 0.87 +0.1 662,517 + ABZR87_RS03150 0.87 -0.8 662,517 + ABZR87_RS03150 0.87 -0.5 662,517 + ABZR87_RS03150 0.87 -1.5 662,517 + ABZR87_RS03150 0.87 -0.3 662,518 - ABZR87_RS03150 0.87 -1.0 662,518 - ABZR87_RS03150 0.87 -0.7 662,518 - ABZR87_RS03150 0.87 +1.3 662,518 - ABZR87_RS03150 0.87 +0.2 662,518 - ABZR87_RS03150 0.87 -0.4 662,518 - ABZR87_RS03150 0.87 +0.6 662,544 + ABZR87_RS03150 0.89 +0.5 662,544 + ABZR87_RS03150 0.89 -0.2 662,544 + ABZR87_RS03150 0.89 +1.4 662,544 + ABZR87_RS03150 0.89 +1.0 662,559 + -1.0 662,559 + +0.5 662,559 + +0.7 662,560 - -0.0 662,652 + +0.8 662,652 + +1.6 662,653 - +0.8 662,720 + -0.7 662,721 - -0.4 662,721 - +0.2 662,721 - -0.4 662,721 - -0.0 662,721 - -0.2 662,743 - +0.5 662,743 - +0.6 662,809 - -0.2 662,809 - +0.4 662,859 - -0.5 662,859 - -1.1 662,908 + -0.6 662,971 - +0.3 663,087 + -0.1 663,087 + -0.0 663,087 + +1.2 663,088 - +0.1 663,180 - ABZR87_RS03155 0.11 -0.0 663,224 + ABZR87_RS03155 0.13 +0.7 663,225 - ABZR87_RS03155 0.13 +0.8 663,335 + ABZR87_RS03155 0.18 +0.2 663,336 - ABZR87_RS03155 0.18 +0.1 663,336 - ABZR87_RS03155 0.18 -0.8
Or see this region's nucleotide sequence